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Gm20005 predicted gene, 20005 [ Mus musculus (house mouse) ]

Gene ID: 100503999, updated on 14-Jan-2023

Summary

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Official Symbol
Gm20005provided by MGI
Official Full Name
predicted gene, 20005provided by MGI
Primary source
MGI:MGI:5012190
See related
AllianceGenome:MGI:5012190
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm43153; Gm45954
Expression
Biased expression in testis adult (RPKM 2.8), CNS E11.5 (RPKM 0.3) and 7 other tissues See more
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Genomic context

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See Gm20005 in Genome Data Viewer
Location:
5 G3; 5 89.18 cM
Exon count:
6
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (149562197..149571252)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (149641222..149647792)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene predicted gene 15997 Neighboring gene WD40 repeat domain 95 Neighboring gene predicted gene, 54316 Neighboring gene predicted gene, 35763 Neighboring gene heat shock 105kDa/110kDa protein 1 Neighboring gene predicted pseudogene 5566 Neighboring gene beta-3-glucosyltransferase Neighboring gene predicted gene, 36141

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    149562197..149571252
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004942704.1 RNA Sequence

  2. XR_001785032.2 RNA Sequence

Nucleotide Protein Strain
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