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Tnfsf13os tumor necrosis factor (ligand) superfamily, member 13, opposite strand [ Mus musculus (house mouse) ]

Gene ID: 100503827, updated on 26-Sep-2022

Summary

Official Symbol
Tnfsf13osprovided by MGI
Official Full Name
tumor necrosis factor (ligand) superfamily, member 13, opposite strandprovided by MGI
Primary source
MGI:MGI:1919587
See related
AllianceGenome:MGI:1919587
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2010012P19Rik
Expression
Broad expression in duodenum adult (RPKM 8.0), colon adult (RPKM 4.7) and 23 other tissues See more
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Genomic context

See Tnfsf13os in Genome Data Viewer
Location:
11; 11 B3
Exon count:
4
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (69572858..69581967)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (69682032..69691141)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4A1 Neighboring gene predicted gene, 25835 Neighboring gene predicted gene, 22988 Neighboring gene SUMO/sentrin specific peptidase 3 Neighboring gene tumor necrosis factor (ligand) superfamily, membrane-bound member 13 Neighboring gene tumor necrosis factor (ligand) superfamily, member 13 Neighboring gene tumor necrosis factor (ligand) superfamily, member 12 Neighboring gene polymerase (RNA) II (DNA directed) polypeptide A Neighboring gene solute carrier family 35, member G3

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Other Names

  • Tnfsf13 opposite strand transcript

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_166808.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL603707
  2. NR_166809.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL603707

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    69572858..69581967
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)