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Gm19705 predicted gene, 19705 [ Mus musculus (house mouse) ]

Gene ID: 100503460, updated on 26-Sep-2022

Summary

Official Symbol
Gm19705provided by MGI
Official Full Name
predicted gene, 19705provided by MGI
Primary source
MGI:MGI:5011890
See related
Ensembl:ENSMUSG00000097113 AllianceGenome:MGI:5011890
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
PHAROH
Expression
Broad expression in placenta adult (RPKM 1.1), liver E14 (RPKM 1.1) and 19 other tissues See more
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Genomic context

See Gm19705 in Genome Data Viewer
Location:
1 E4; 1 59.94 cM
Exon count:
4
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (136611134..136618543)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (136683396..136690805)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene zinc finger protein 281 Neighboring gene predicted gene, 34056 Neighboring gene predicted gene, 41958 Neighboring gene pluripotency associated transcript 22 Neighboring gene predicted gene, 24086 Neighboring gene macrophage migration inhibitory factor, pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045324.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    BE447944, BF661059
    Related
    ENSMUST00000181524.9
  2. NR_045325.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an exon and contains an alternate exon in the 5' region, compared to variant 1.
    Source sequence(s)
    AV450327, BF661059
    Related
    ENSMUST00000180962.2

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    136611134..136618543
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)