U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

1700007L15Rik RIKEN cDNA 1700007L15 gene [ Mus musculus (house mouse) ]

Gene ID: 100502742, updated on 26-Sep-2022

Summary

Official Symbol
1700007L15Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700007L15 geneprovided by MGI
Primary source
MGI:MGI:1916581
See related
Ensembl:ENSMUSG00000097318 AllianceGenome:MGI:1916581
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
linc1609; linc-Iqcg
Expression
Biased expression in testis adult (RPKM 13.7), genital fat pad adult (RPKM 1.7) and 9 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See 1700007L15Rik in Genome Data Viewer
Location:
16; 16 B3
Exon count:
2
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (33200224..33201106, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (33379854..33380736, complement)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 52274 Neighboring gene sorting nexin 4 Neighboring gene zinc finger protein 148 Neighboring gene solute carrier family 12 (potassium/chloride transporters), member 8

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045709.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC122247
    Related
    ENSMUST00000231849.3

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    33200224..33201106 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)