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LINC00881 long intergenic non-protein coding RNA 881 [ Homo sapiens (human) ]

Gene ID: 100498859, updated on 9-Jun-2025
Official Symbol
LINC00881provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 881provided by HGNC
Primary source
HGNC:HGNC:48567
See related
Ensembl:ENSG00000241135 AllianceGenome:HGNC:48567
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LIPTER
Expression
Biased expression in heart (RPKM 9.1) and thyroid (RPKM 1.3) See more
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See LINC00881 in Genome Data Viewer
Location:
3q25.31
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (157089881..157101135)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (159864419..159875673)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (156807670..156818924)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene leucine, glutamate and lysine rich 1 Neighboring gene RN7SK pseudogene 177 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:156760074-156760241 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14842 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20735 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14843 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20736 Neighboring gene long intergenic non-protein coding RNA 880 Neighboring gene long intergenic non-protein coding RNA 2029 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20737 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr3:156845958-156847157 Neighboring gene Sharpr-MPRA regulatory region 13439 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14844 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20739 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14845 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:156877851-156878580 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20740 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20741 Neighboring gene keratin 18 pseudogene 34 Neighboring gene cyclin L1

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Related articles in PubMed

  1. Effect of mechanical unloading on genome-wide DNA methylation profile of the failing human heart. Liao X, et al. JCI Insight, 2023 Feb 22. PMID 36656640, Free PMC Article
  2. Lipid droplet-associated lncRNA LIPTER preserves cardiac lipid metabolism. Han L, et al. Nat Cell Biol, 2023 Jul. PMID 37264180, Free PMC Article
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Kimura K, et al. Genome Res, 2006 Jan. PMID 16344560, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Lipid droplet-associated lncRNA LIPTER preserves cardiac lipid metabolism.
    Title: Lipid droplet-associated lncRNA LIPTER preserves cardiac lipid metabolism.
Submit: New GeneRIF Correction

Review eQTL and phenotype association data in this region using PheGenI

See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Markers

Other Names

  • Lipid-Droplet Transporter

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_034008.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AI192928, DA560258
    Related
    ENST00000781938.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    157089881..157101135
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    159864419..159875673
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Chemical Information
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