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trhd tumorhead [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100497040, updated on 6-Oct-2023

Summary

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Official Symbol
trhdprovided by Xenbase
Official Full Name
tumorheadprovided by Xenbase
Primary source
Xenbase:XB-GENE-1214876
See related
Ensembl:ENSXETG00000045658
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
TH; trhd-a; trhd-b
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Genomic context

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Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (47908918..47922454)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (39578475..39591994)

Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 40 member 1 Neighboring gene WD repeat domain 75 Neighboring gene collagen, type V, alpha 2 Neighboring gene collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein trhd

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    47908918..47922454
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004917847.2 → XP_004917904.1  uncharacterized protein trhd

    See identical proteins and their annotated locations for XP_004917904.1

    UniProtKB/TrEMBL
    A0A803J286
    Related
    ENSXETP00000101929.1, ENSXETT00000114719.1
    Conserved Domains (1) summary
    pfam13873
    Location:104 → 179
    Myb_DNA-bind_5; Myb/SANT-like DNA-binding domain

  2. XM_004917846.4 → XP_004917903.1  uncharacterized protein trhd

    See identical proteins and their annotated locations for XP_004917903.1

    UniProtKB/TrEMBL
    A0A803J286
    Related
    ENSXETP00000111883.1, ENSXETT00000108125.1
    Conserved Domains (1) summary
    pfam13873
    Location:104 → 179
    Myb_DNA-bind_5; Myb/SANT-like DNA-binding domain

  3. XM_002931526.5 → XP_002931572.1  uncharacterized protein trhd

    See identical proteins and their annotated locations for XP_002931572.1

    UniProtKB/TrEMBL
    A0A803J286
    Related
    ENSXETP00000115444.1, ENSXETT00000106520.1
    Conserved Domains (1) summary
    pfam13873
    Location:104 → 179
    Myb_DNA-bind_5; Myb/SANT-like DNA-binding domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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