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kcnq2 potassium channel, voltage gated KQT-like subfamily Q, member 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100492090, updated on 8-Mar-2024

Summary

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Official Symbol
kcnq2provided by Xenbase
Official Full Name
potassium channel, voltage gated KQT-like subfamily Q, member 2provided by Xenbase
Primary source
Xenbase:XB-GENE-6047373
See related
Ensembl:ENSXETG00000032009
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
kv7.2; k(v)7.2
Orthologs
human mouse all
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Genomic context

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See kcnq2 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
18
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 10 NC_030686.2 (2012251..2046235)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016683902.1 (8549..45497)

Chromosome 10 - NC_030686.2Genomic Context describing neighboring genes Neighboring gene pancreatic progenitor cell differentiation and proliferation factor Neighboring gene eukaryotic translation elongation factor 1 alpha 2 Neighboring gene E3 ubiquitin/ISG15 ligase TRIM25 Neighboring gene cholinergic receptor, nicotinic alpha 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
  
enables potassium channel activity IEA
Inferred from Electronic Annotation
more info
  
enables voltage-gated potassium channel activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within potassium ion transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
part_of voltage-gated potassium channel complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
potassium voltage-gated channel subfamily KQT member 2
Names
potassium voltage-gated channel subfamily Q member 2
potassium voltage-gated channel, KQT-like subfamily, member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030686.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    2012251..2046235
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031894621.1 → XP_031750481.1  potassium voltage-gated channel subfamily KQT member 2 isoform X4

    UniProtKB/TrEMBL
    A0A8J1J182, F6SB39
    Related
    ENSXETP00000049801.5, ENSXETT00000049801.5
    Conserved Domains (4) summary
    pfam00520
    Location:90 → 322
    Ion_trans; Ion transport protein
    pfam03520
    Location:458 → 645
    KCNQ_channel; KCNQ voltage-gated potassium channel
    pfam11956
    Location:763 → 860
    KCNQC3-Ank-G_bd; Ankyrin-G binding motif of KCNQ2-3
    pfam16642
    Location:660 → 752
    KCNQ2_u3; Unstructured region on Potassium channel subunit alpha KvLQT2

  2. XM_031894617.1 → XP_031750477.1  potassium voltage-gated channel subfamily KQT member 2 isoform X1

    UniProtKB/TrEMBL
    A0A803K497, F6SB39
    Related
    ENSXETP00000115114.1, ENSXETT00000113737.1
    Conserved Domains (4) summary
    pfam00520
    Location:90 → 322
    Ion_trans; Ion transport protein
    pfam03520
    Location:444 → 667
    KCNQ_channel; KCNQ voltage-gated potassium channel
    pfam11956
    Location:785 → 882
    KCNQC3-Ank-G_bd; Ankyrin-G binding motif of KCNQ2-3
    pfam16642
    Location:682 → 774
    KCNQ2_u3; Unstructured region on Potassium channel subunit alpha KvLQT2

  3. XM_031894620.1 → XP_031750480.1  potassium voltage-gated channel subfamily KQT member 2 isoform X3

    UniProtKB/TrEMBL
    A0A803JMV6, F6SB39
    Related
    ENSXETP00000109323.1, ENSXETT00000106675.1
    Conserved Domains (4) summary
    pfam00520
    Location:90 → 322
    Ion_trans; Ion transport protein
    pfam03520
    Location:444 → 631
    KCNQ_channel; KCNQ voltage-gated potassium channel
    pfam11956
    Location:749 → 846
    KCNQC3-Ank-G_bd; Ankyrin-G binding motif of KCNQ2-3
    pfam16642
    Location:646 → 738
    KCNQ2_u3; Unstructured region on Potassium channel subunit alpha KvLQT2

  4. XM_031894618.1 → XP_031750478.1  potassium voltage-gated channel subfamily KQT member 2 isoform X2

    UniProtKB/TrEMBL
    A0A6I8SIM6, F6SB39
    Related
    ENSXETP00000097179.2, ENSXETT00000090268.2
    Conserved Domains (4) summary
    pfam00520
    Location:90 → 322
    Ion_trans; Ion transport protein
    pfam03520
    Location:436 → 659
    KCNQ_channel; KCNQ voltage-gated potassium channel
    pfam11956
    Location:777 → 874
    KCNQC3-Ank-G_bd; Ankyrin-G binding motif of KCNQ2-3
    pfam16642
    Location:674 → 766
    KCNQ2_u3; Unstructured region on Potassium channel subunit alpha KvLQT2

  5. XM_031894622.1 → XP_031750482.1  potassium voltage-gated channel subfamily KQT member 2 isoform X5

    UniProtKB/TrEMBL
    A0A8J1IY01, F6SB39
    Conserved Domains (4) summary
    pfam00520
    Location:90 → 322
    Ion_trans; Ion transport protein
    pfam03520
    Location:436 → 623
    KCNQ_channel; KCNQ voltage-gated potassium channel
    pfam11956
    Location:741 → 838
    KCNQC3-Ank-G_bd; Ankyrin-G binding motif of KCNQ2-3
    pfam16642
    Location:638 → 730
    KCNQ2_u3; Unstructured region on Potassium channel subunit alpha KvLQT2
Nucleotide Protein Strain
Heading Accession and Version

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