U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CTLA4 cytotoxic T-lymphocyte associated protein 4 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100477398, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CTLA4
Gene description
cytotoxic T-lymphocyte associated protein 4
Locus tag
PANDA_008674
See related
Ensembl:ENSAMEG00000002942
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CTLA4 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 2 NC_048219.1 (168016962..168023129)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217662.1 (1216653..1222746, complement)

Chromosome 2 - NC_048219.1Genomic Context describing neighboring genes Neighboring gene CD28 molecule Neighboring gene 60S ribosomal protein L26-like Neighboring gene inducible T cell costimulator Neighboring gene uncharacterized LOC105237943

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in B cell receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in T cell receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of regulatory T cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of T cell proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cytotoxic T-lymphocyte protein 4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048219.1 Reference ASM200744v2 Primary Assembly

    Range
    168016962..168023129
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002919948.4 → XP_002919994.1  cytotoxic T-lymphocyte protein 4 isoform X1

    See identical proteins and their annotated locations for XP_002919994.1

    UniProtKB/TrEMBL
    D2HDB8
    Related
    ENSAMEP00000038817.1, ENSAMET00000030302.1
    Conserved Domains (2) summary
    smart00410
    Location:72 → 132
    IG_like; Immunoglobulin like
    cl11960
    Location:39 → 152
    Ig; Immunoglobulin domain

  2. XM_011225870.3 → XP_011224172.1  cytotoxic T-lymphocyte protein 4 isoform X2

    UniProtKB/TrEMBL
    G1L880
    Related
    ENSAMEP00000003096.2, ENSAMET00000003224.2
    Conserved Domains (2) summary
    smart00410
    Location:72 → 132
    IG_like; Immunoglobulin like
    cl11960
    Location:39 → 152
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.