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ASB8 ankyrin repeat and SOCS box containing 8 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100471687, updated on 8-Mar-2024

Summary

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Gene symbol
ASB8
Gene description
ankyrin repeat and SOCS box containing 8
Locus tag
PANDA_009079
See related
Ensembl:ENSAMEG00000013894
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
5
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 16 NC_048233.1 (38312370..38320585, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217694.1 (1424895..1433062, complement)

Chromosome 16 - NC_048233.1Genomic Context describing neighboring genes Neighboring gene collagen type II alpha 1 chain Neighboring gene SUMO specific peptidase 1 Neighboring gene phosphofructokinase, muscle Neighboring gene coiled-coil domain-containing protein 184 Neighboring gene coiled-coil domain containing 184

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and SOCS box protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048233.1 Reference ASM200744v2 Primary Assembly

    Range
    38312370..38320585 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011226317.3 → XP_011224619.1  ankyrin repeat and SOCS box protein 8 isoform X1

    See identical proteins and their annotated locations for XP_011224619.1

    UniProtKB/TrEMBL
    D2HE78
    Related
    ENSAMEP00000014650.1, ENSAMET00000015257.2
    Conserved Domains (3) summary
    PHA02876
    Location:26 → 215
    PHA02876; ankyrin repeat protein; Provisional
    cd03727
    Location:245 → 286
    SOCS_ASB8; SOCS (suppressors of cytokine signaling) box of ASB8-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. Human ASB8 is highly transcribed in skeletal muscle and in lung carcinoma cell lines. The ...
    sd00045
    Location:56 → 83
    ANK; ANK repeat [structural motif]

  2. XM_019800809.2 → XP_019656368.1  ankyrin repeat and SOCS box protein 8 isoform X2

    Conserved Domains (3) summary
    cd03727
    Location:184 → 225
    SOCS_ASB8; SOCS (suppressors of cytokine signaling) box of ASB8-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. Human ASB8 is highly transcribed in skeletal muscle and in lung carcinoma cell lines. The ...
    sd00045
    Location:24 → 54
    ANK; ANK repeat [structural motif]
    cl39094
    Location:8 → 120
    Ank_2; Ankyrin repeats (3 copies)

  3. XM_019800808.2 → XP_019656367.1  ankyrin repeat and SOCS box protein 8 isoform X1

    UniProtKB/TrEMBL
    D2HE78
    Conserved Domains (3) summary
    PHA02876
    Location:26 → 215
    PHA02876; ankyrin repeat protein; Provisional
    cd03727
    Location:245 → 286
    SOCS_ASB8; SOCS (suppressors of cytokine signaling) box of ASB8-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. Human ASB8 is highly transcribed in skeletal muscle and in lung carcinoma cell lines. The ...
    sd00045
    Location:56 → 83
    ANK; ANK repeat [structural motif]

  4. XM_034644726.1 → XP_034500617.1  ankyrin repeat and SOCS box protein 8 isoform X2

    Conserved Domains (3) summary
    cd03727
    Location:184 → 225
    SOCS_ASB8; SOCS (suppressors of cytokine signaling) box of ASB8-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. Human ASB8 is highly transcribed in skeletal muscle and in lung carcinoma cell lines. The ...
    sd00045
    Location:24 → 54
    ANK; ANK repeat [structural motif]
    cl39094
    Location:8 → 120
    Ank_2; Ankyrin repeats (3 copies)

  5. XM_011226318.3 → XP_011224620.1  ankyrin repeat and SOCS box protein 8 isoform X1

    See identical proteins and their annotated locations for XP_011224620.1

    UniProtKB/TrEMBL
    D2HE78
    Conserved Domains (3) summary
    PHA02876
    Location:26 → 215
    PHA02876; ankyrin repeat protein; Provisional
    cd03727
    Location:245 → 286
    SOCS_ASB8; SOCS (suppressors of cytokine signaling) box of ASB8-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. Human ASB8 is highly transcribed in skeletal muscle and in lung carcinoma cell lines. The ...
    sd00045
    Location:56 → 83
    ANK; ANK repeat [structural motif]

  6. XM_002920305.4 → XP_002920351.1  ankyrin repeat and SOCS box protein 8 isoform X1

    See identical proteins and their annotated locations for XP_002920351.1

    UniProtKB/TrEMBL
    D2HE78
    Conserved Domains (3) summary
    PHA02876
    Location:26 → 215
    PHA02876; ankyrin repeat protein; Provisional
    cd03727
    Location:245 → 286
    SOCS_ASB8; SOCS (suppressors of cytokine signaling) box of ASB8-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. Human ASB8 is highly transcribed in skeletal muscle and in lung carcinoma cell lines. The ...
    sd00045
    Location:56 → 83
    ANK; ANK repeat [structural motif]
Nucleotide Protein
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