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LOC100436096 cryptic protein [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100436096, updated on 26-Mar-2024

Summary

Gene symbol
LOC100436096
Gene description
cryptic protein
Locus tag
CR201_G0051763
See related
Ensembl:ENSPPYG00000012745
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Also known as
CFC1
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Genomic context

See LOC100436096 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 11 NC_071996.2 (17718497..17726034, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 2B NC_071987.1 (15123038..15130575, complement)

Chromosome 11 - NC_071996.2Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 148 Neighboring gene serine protease 40 Neighboring gene POTE ankyrin domain family member I Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC100437238

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables activin receptor binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables nodal binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in anterior/posterior pattern specification IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in blood vessel development IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in determination of left/right symmetry IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in heart development IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in nodal signaling pathway IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
cryptic protein; uncharacterized protein LOC100436096
Names
CFC1B
cripto, FRL-1, cryptic family 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071996.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    17718497..17726034 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002812356.5XP_002812402.4  cryptic protein isoform X1

  2. XM_009237600.4XP_009235875.4  uncharacterized protein LOC100436096 isoform X2