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HDAC8 histone deacetylase 8 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100434761, updated on 27-Jul-2017
Gene symbol
HDAC8
Gene description
histone deacetylase 8
See related
Ensembl:ENSPPYG00000020464
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
Location:
chromosome: X
Exon count:
14
Annotation release Status Assembly Chr Location
102 current P_pygmaeus_2.0.2 (GCF_000001545.4) X NC_012614.1 (69753097..70004850, complement)

Chromosome X - NC_012614.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S4, X-linked Neighboring gene Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 Neighboring gene phosphorylase kinase regulatory subunit alpha 1 Neighboring gene F-actin-capping protein subunit alpha-1 pseudogene

Genomic Sequence:
NC_012614.1 Chromosome X Reference P_pygmaeus_2.0.2 Primary Assembly

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Alcoholism, organism-specific biosystem (from KEGG)
    Alcoholism, organism-specific biosystemAlcoholism, also called dependence on alcohol (ethanol), is a chronic relapsing disorder that is progressive and has serious detrimental health outcomes. As one of the primary mediators of the reward...
  • Alcoholism, conserved biosystem (from KEGG)
    Alcoholism, conserved biosystemAlcoholism, also called dependence on alcohol (ethanol), is a chronic relapsing disorder that is progressive and has serious detrimental health outcomes. As one of the primary mediators of the reward...
  • Viral carcinogenesis, organism-specific biosystem (from KEGG)
    Viral carcinogenesis, organism-specific biosystemThere is a strong association between viruses and the development of human malignancies. We now know that at least six human viruses, Epstein-Barr virus (EBV), hepatitis B virus (HBV), hepatitis C vi...
  • Viral carcinogenesis, conserved biosystem (from KEGG)
    Viral carcinogenesis, conserved biosystemThere is a strong association between viruses and the development of human malignancies. We now know that at least six human viruses, Epstein-Barr virus (EBV), hepatitis B virus (HBV), hepatitis C vi...

Markers

Homology

RefSeqs of Annotated Genomes: Pongo abelii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_pygmaeus_2.0.2 Primary Assembly

Genomic

  1. NC_012614.1 Reference P_pygmaeus_2.0.2 Primary Assembly

    Range
    69753097..70004850 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009234984.1XP_009233259.1  histone deacetylase 8 isoform X4

    Conserved Domains (1) summary
    cl17011
    Location:54284
    Arginase_HDAC; Arginase-like and histone-like hydrolases
  2. XM_002831802.1XP_002831848.1  histone deacetylase 8 isoform X2

    See identical proteins and their annotated locations for XP_002831848.1

    Conserved Domains (1) summary
    cd10000
    Location:54415
    HDAC8; Histone deacetylase 8 (HDAC8)
  3. XM_009234983.1XP_009233258.1  histone deacetylase 8 isoform X3

    Conserved Domains (1) summary
    cl17011
    Location:54284
    Arginase_HDAC; Arginase-like and histone-like hydrolases
  4. XM_009234982.1XP_009233257.1  histone deacetylase 8 isoform X1

    Conserved Domains (1) summary
    cd10000
    Location:54408
    HDAC8; Histone deacetylase 8 (HDAC8)
  5. XM_009234985.1XP_009233260.1  histone deacetylase 8 isoform X5

    UniProtKB/TrEMBL
    H2PW08
    Related
    ENSPPYP00000022911, ENSPPYT00000023874
    Conserved Domains (1) summary
    cl17011
    Location:54284
    Arginase_HDAC; Arginase-like and histone-like hydrolases
  6. XM_009234986.1XP_009233261.1  histone deacetylase 8 isoform X6

    Conserved Domains (1) summary
    cl17011
    Location:54185
    Arginase_HDAC; Arginase-like and histone-like hydrolases
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