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HOXC4 homeobox C4 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 100430434, updated on 17-Dec-2025
Gene symbol
HOXC4
Gene description
homeobox C4
Locus tag
EGK_03727
See related
Ensembl:ENSMMUG00000055610
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
all
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See HOXC4 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2025_08 current T2T-MMU8v2.0 (GCF_049350105.2) 11 NC_133416.1 (61236556..61238778)
103 previous assembly Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (53655926..53658151)

Chromosome 11 - NC_133416.1Genomic Context describing neighboring genes Neighboring gene ATP synthase membrane subunit c locus 2 Neighboring gene homeobox C6 Neighboring gene microRNA mir-615 Neighboring gene uncharacterized LOC107000878 Neighboring gene homeobox C5 Neighboring gene uncharacterized LOC107000879

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anterior/posterior pattern specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in embryonic skeletal system morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
homeobox protein Hox-C4
Names
Homeobox protein Hox-3E

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001194756.3 → NP_001181685.1  homeobox protein Hox-C4

    See identical proteins and their annotated locations for NP_001181685.1

    Status: PROVISIONAL

    Source sequence(s)
    QNVO02000060
    UniProtKB/TrEMBL
    A0A5F7ZQ75, A0A8J8YIU4, F7HTX5
    Related
    ENSMMUP00000066785.1, ENSMMUT00000079264.1
    Conserved Domains (1) summary
    pfam00046
    Location:159 → 213
    Homeobox; Homeobox domain

RefSeqs of Annotated Genomes: GCF_049350105.2-RS_2025_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MMU8v2.0

Genomic

  1. NC_133416.1 Reference T2T-MMU8v2.0

    Range
    61236556..61238778
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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