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THAP12P2 THAP domain containing 12 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 100422711, updated on 10-Oct-2023

Summary

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Official Symbol
THAP12P2provided by HGNC
Official Full Name
THAP domain containing 12 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:39566
See related
AllianceGenome:HGNC:39566
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PRKRIRP2
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Genomic context

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Location:
3p12.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (86012417..86015519)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (86084257..86087359)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (86061567..86064669)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene cell adhesion molecule 2 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:85443162-85443393 Neighboring gene microRNA 5688 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:85625238-85625814 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:85794578-85794816 Neighboring gene CADM2 antisense RNA 2 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:86132353-86132853 Neighboring gene small nucleolar RNA Z40 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr3:86224689-86225518 Neighboring gene uncharacterized LOC102723364 Neighboring gene RNA, U6 small nuclear 1129, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) pseudogene 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_025711.3 

    Range
    101..3203
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    86012417..86015519
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    86084257..86087359
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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