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TMPRSS9 transmembrane serine protease 9 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100411504, updated on 3-Apr-2024

Summary

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Gene symbol
TMPRSS9
Gene description
transmembrane serine protease 9
See related
Ensembl:ENSCJAG00000013546
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 22 NC_071463.1 (1967385..2038825)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 22 NC_048404.1 (1944347..2015280)

Chromosome 22 - NC_071463.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat and Ig domain containing 3 Neighboring gene LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated Neighboring gene signal peptide peptidase like 2B Neighboring gene uncharacterized LOC128930514 Neighboring gene translocase of inner mitochondrial membrane 13 Neighboring gene lamin B2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane protease serine 9
Names
transmembrane protease, serine 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071463.1 Reference mCalJa1.2.pat.X

    Range
    1967385..2038825
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054250160.1 → XP_054106135.1  transmembrane protease serine 9 isoform X2

  2. XM_035287109.2 → XP_035143000.1  transmembrane protease serine 9 isoform X1

    UniProtKB/TrEMBL
    A0A5F4W131, F6R336
    Conserved Domains (4) summary
    smart00020
    Location:236 → 465
    Tryp_SPc; Trypsin-like serine protease
    cd00112
    Location:188 → 223
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
    cd00190
    Location:863 → 1089
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    pfam01390
    Location:66 → 127
    SEA; SEA domain

  3. XM_054250161.1 → XP_054106136.1  transmembrane protease serine 9 isoform X3

  4. XM_035287107.2 → XP_035142998.1  transmembrane protease serine 9 isoform X1

    UniProtKB/TrEMBL
    A0A5F4W131, F6R336
    Conserved Domains (4) summary
    smart00020
    Location:236 → 465
    Tryp_SPc; Trypsin-like serine protease
    cd00112
    Location:188 → 223
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
    cd00190
    Location:863 → 1089
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    pfam01390
    Location:66 → 127
    SEA; SEA domain

  5. XM_054250163.1 → XP_054106138.1  transmembrane protease serine 9 isoform X3

  6. XM_035287108.2 → XP_035142999.1  transmembrane protease serine 9 isoform X1

    UniProtKB/TrEMBL
    A0A5F4W131, F6R336
    Conserved Domains (4) summary
    smart00020
    Location:236 → 465
    Tryp_SPc; Trypsin-like serine protease
    cd00112
    Location:188 → 223
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
    cd00190
    Location:863 → 1089
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    pfam01390
    Location:66 → 127
    SEA; SEA domain

  7. XM_054250162.1 → XP_054106137.1  transmembrane protease serine 9 isoform X3

Nucleotide Protein
Heading Accession and Version

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