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FOXP2 forkhead box P2 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100411307, updated on 3-Dec-2024
Gene symbol
FOXP2
Gene description
forkhead box P2
See related
Ensembl:ENSCJAG00000017044
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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See FOXP2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 8 NC_071449.1 (81941798..82534468)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 8 NC_048390.1 (82720059..83313423)

Chromosome 8 - NC_071449.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118143717 Neighboring gene protein phosphatase 1 regulatory subunit 3A Neighboring gene 60S ribosomal protein L36-like Neighboring gene 5S ribosomal RNA Neighboring gene MyoD family inhibitor domain containing

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
forkhead box protein P2

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071449.1 Reference mCalJa1.2.pat.X

    Range
    81941798..82534468
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035254183.2 → XP_035110074.1  forkhead box protein P2 isoform X10

    UniProtKB/TrEMBL
    F6TAH4
    Conserved Domains (3) summary
    COG5025
    Location:475 → 706
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:340 → 407
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:501 → 582
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  2. XM_054237457.1 → XP_054093432.1  forkhead box protein P2 isoform X1

    UniProtKB/TrEMBL
    A0A8I3WU72

  3. XM_035254174.2 → XP_035110065.1  forkhead box protein P2 isoform X1

    UniProtKB/TrEMBL
    A0A8I3WU72
    Conserved Domains (3) summary
    COG5025
    Location:523 → 754
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:388 → 455
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:549 → 630
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  4. XM_054237452.1 → XP_054093427.1  forkhead box protein P2 isoform X1

    UniProtKB/TrEMBL
    A0A8I3WU72

  5. XM_054237459.1 → XP_054093434.1  forkhead box protein P2 isoform X2

    UniProtKB/TrEMBL
    A0A8I3WU72

  6. XM_035254175.2 → XP_035110066.1  forkhead box protein P2 isoform X3

    UniProtKB/TrEMBL
    A0A8I3WU72, B0VXL6
    Conserved Domains (3) summary
    COG5025
    Location:517 → 748
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:382 → 449
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:543 → 624
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  7. XM_054237460.1 → XP_054093435.1  forkhead box protein P2 isoform X6

    UniProtKB/TrEMBL
    A0A8I3WU72

  8. XM_054237461.1 → XP_054093436.1  forkhead box protein P2 isoform X8

    UniProtKB/TrEMBL
    A0A8I3WU72

  9. XM_054237455.1 → XP_054093430.1  forkhead box protein P2 isoform X1

    UniProtKB/TrEMBL
    A0A8I3WU72

  10. XM_017975473.3 → XP_017830962.1  forkhead box protein P2 isoform X4

    UniProtKB/TrEMBL
    F6TAH4, F7IF16
    Related
    ENSCJAP00000031433.1
    Conserved Domains (3) summary
    COG5025
    Location:500 → 731
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:365 → 432
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:526 → 607
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  11. XM_054237462.1 → XP_054093437.1  forkhead box protein P2 isoform X9

    UniProtKB/TrEMBL
    F6TAH4

  12. XM_035254177.2 → XP_035110068.1  forkhead box protein P2 isoform X5

    UniProtKB/TrEMBL
    A0A8I3WU72
    Conserved Domains (3) summary
    COG5025
    Location:498 → 729
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:363 → 430
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:524 → 605
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  13. XM_035254179.2 → XP_035110070.1  forkhead box protein P2 isoform X7

    UniProtKB/TrEMBL
    A0A8I3WU72, F7IHC2
    Conserved Domains (3) summary
    COG5025
    Location:492 → 723
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:357 → 424
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:518 → 599
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  14. XM_054237463.1 → XP_054093438.1  forkhead box protein P2 isoform X11

    UniProtKB/TrEMBL
    F6TAH4

  15. XM_054237465.1 → XP_054093440.1  forkhead box protein P2 isoform X12

    UniProtKB/TrEMBL
    F6TAH4

  16. XM_054237453.1 → XP_054093428.1  forkhead box protein P2 isoform X1

    UniProtKB/TrEMBL
    A0A8I3WU72

  17. XM_054237454.1 → XP_054093429.1  forkhead box protein P2 isoform X1

    UniProtKB/TrEMBL
    A0A8I3WU72

  18. XM_054237456.1 → XP_054093431.1  forkhead box protein P2 isoform X1

    UniProtKB/TrEMBL
    A0A8I3WU72

  19. XM_035254176.2 → XP_035110067.1  forkhead box protein P2 isoform X4

    UniProtKB/TrEMBL
    F6TAH4, F7IF16
    Conserved Domains (3) summary
    COG5025
    Location:500 → 731
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:365 → 432
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:526 → 607
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  20. XM_035254178.2 → XP_035110069.1  forkhead box protein P2 isoform X5

    UniProtKB/TrEMBL
    A0A8I3WU72
    Conserved Domains (3) summary
    COG5025
    Location:498 → 729
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:363 → 430
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:524 → 605
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  21. XM_035254180.2 → XP_035110071.1  forkhead box protein P2 isoform X7

    UniProtKB/TrEMBL
    A0A8I3WU72, F7IHC2
    Conserved Domains (3) summary
    COG5025
    Location:492 → 723
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:357 → 424
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:518 → 599
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  22. XM_054237464.1 → XP_054093439.1  forkhead box protein P2 isoform X11

    UniProtKB/TrEMBL
    F6TAH4

  23. XM_035254182.2 → XP_035110073.1  forkhead box protein P2 isoform X10

    UniProtKB/TrEMBL
    F6TAH4
    Conserved Domains (3) summary
    COG5025
    Location:475 → 706
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:340 → 407
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:501 → 582
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  24. XM_054237458.1 → XP_054093433.1  forkhead box protein P2 isoform X1

    UniProtKB/TrEMBL
    A0A8I3WU72

  25. XM_054237466.1 → XP_054093441.1  forkhead box protein P2 isoform X13

    UniProtKB/TrEMBL
    A0A8I3WU72

  26. XM_054237467.1 → XP_054093442.1  forkhead box protein P2 isoform X13

    UniProtKB/TrEMBL
    A0A8I3WU72

  27. XM_054237468.1 → XP_054093443.1  forkhead box protein P2 isoform X13

    UniProtKB/TrEMBL
    A0A8I3WU72
Nucleotide Protein
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