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HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100406704, updated on 8-Mar-2024

Summary

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Gene symbol
HNRNPH2
Gene description
heterogeneous nuclear ribonucleoprotein H2
See related
Ensembl:ENSCJAG00000004908
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) X NC_071464.1 (94210682..94216730)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) X NC_048405.1 (95979216..95985264)

Chromosome X - NC_071464.1Genomic Context describing neighboring genes Neighboring gene Bruton tyrosine kinase Neighboring gene ribosomal protein L36a Neighboring gene galactosidase alpha Neighboring gene DNA replication complex GINS protein PSF3-like Neighboring gene RNA-binding motif protein, X chromosome-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heterogeneous nuclear ribonucleoprotein H2
Names
heterogeneous nuclear ribonucleoprotein H2 (H')

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071464.1 Reference mCalJa1.2.pat.X

    Range
    94210682..94216730
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002763090.4 → XP_002763136.1  heterogeneous nuclear ribonucleoprotein H2

    See identical proteins and their annotated locations for XP_002763136.1

    UniProtKB/TrEMBL
    F7I5M7, U3DUF3, U3EAJ2
    Related
    ENSCJAP00000008959.1
    Conserved Domains (4) summary
    pfam08080
    Location:257 → 290
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:10 → 88
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:103 → 192
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:289 → 364
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  2. XM_008989607.3 → XP_008987855.1  heterogeneous nuclear ribonucleoprotein H2

    See identical proteins and their annotated locations for XP_008987855.1

    UniProtKB/TrEMBL
    F7I5M7, U3DUF3, U3EAJ2
    Conserved Domains (4) summary
    pfam08080
    Location:257 → 290
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:10 → 88
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:103 → 192
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:289 → 364
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
Nucleotide Protein
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