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ATOH1 atonal bHLH transcription factor 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100400122, updated on 8-Mar-2024
Gene symbol
ATOH1
Gene description
atonal bHLH transcription factor 1
See related
Ensembl:ENSCJAG00000022028
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 3 NC_071444.1 (99847849..99850085, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 3 NC_048385.1 (102475892..102478095, complement)

Chromosome 3 - NC_071444.1Genomic Context describing neighboring genes Neighboring gene U7 small nuclear RNA Neighboring gene 60S acidic ribosomal protein P0-like Neighboring gene uncharacterized LOC118152247 Neighboring gene uncharacterized LOC128931590 Neighboring gene glutamate ionotropic receptor delta type subunit 2 Neighboring gene 40S ribosomal protein S2-like

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
transcription factor ATOH1
Names
atonal homolog 1

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071444.1 Reference mCalJa1.2.pat.X

    Range
    99847849..99850085 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002745585.4 → XP_002745631.1  transcription factor ATOH1

    UniProtKB/TrEMBL
    F7I4M2
    Related
    ENSCJAP00000040698.1
    Conserved Domains (1) summary
    cd00083
    Location:158 → 216
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
Nucleotide Protein
Heading Accession and Version

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