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KLRC2 killer cell lectin like receptor C2 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100398258, updated on 8-Mar-2024

Summary

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Gene symbol
KLRC2
Gene description
killer cell lectin like receptor C2
See related
Ensembl:ENSCJAG00000021663
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Also known as
NKG2CE
Orthologs
human all
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Genomic context

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See KLRC2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 9 NC_071450.1 (10689054..10698587)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 9 NC_048391.1 (10607890..10615537)

Chromosome 9 - NC_071450.1Genomic Context describing neighboring genes Neighboring gene mago homolog B, exon junction complex subunit Neighboring gene killer cell lectin like receptor C1 Neighboring gene NKG2-F type II integral membrane protein-like Neighboring gene killer cell lectin like receptor K1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomics and diversity of the common marmoset monkey NK complex. Averdam A, et al. J Immunol, 2007 Jun 1. PMID 17513764
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of natural killer cell mediated cytotoxicity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in stimulatory C-type lectin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NKG2-C type II integral membrane protein
Names
killer cell lectin-like receptor subfamily C, member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001257247.1 → NP_001244176.1  NKG2-C type II integral membrane protein

    See identical proteins and their annotated locations for NP_001244176.1

    Status: PROVISIONAL

    Source sequence(s)
    EF050434
    UniProtKB/TrEMBL
    A4GHC9, F7HXV6
    Related
    ENSCJAP00000040321.2, ENSCJAT00000042589.2
    Conserved Domains (1) summary
    cd03593
    Location:117 → 230
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071450.1 Reference mCalJa1.2.pat.X

    Range
    10689054..10698587
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035255146.2 → XP_035111037.1  NKG2-C type II integral membrane protein isoform X1

    Conserved Domains (1) summary
    cd03593
    Location:88 → 201
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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