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SAP30BP SAP30 binding protein [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100398235, updated on 3-Apr-2024

Summary

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Gene symbol
SAP30BP
Gene description
SAP30 binding protein
See related
Ensembl:ENSCJAG00000014157
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 5 NC_071446.1 (127643552..127699777)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 5 NC_048387.1 (130356348..130412621)

Chromosome 5 - NC_071446.1Genomic Context describing neighboring genes Neighboring gene LLGL scribble cell polarity complex component 2 Neighboring gene myosin XVB Neighboring gene RecQ like helicase 5 Neighboring gene small integral membrane protein 5 Neighboring gene small integral membrane protein 6 Neighboring gene uncharacterized LOC118153878 Neighboring gene integrin subunit beta 4 Neighboring gene galactokinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SAP30-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071446.1 Reference mCalJa1.2.pat.X

    Range
    127643552..127699777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054256499.1 → XP_054112474.1  SAP30-binding protein isoform X1

  2. XM_054256502.1 → XP_054112477.1  SAP30-binding protein isoform X3

  3. XM_054256500.1 → XP_054112475.1  SAP30-binding protein isoform X2

  4. XM_054256503.1 → XP_054112478.1  SAP30-binding protein isoform X4

    UniProtKB/TrEMBL
    A0A8I4A5L8

  5. XM_054256504.1 → XP_054112479.1  SAP30-binding protein isoform X5

    UniProtKB/TrEMBL
    A0A2R8MXJ2

  6. XM_002748739.6 → XP_002748785.1  SAP30-binding protein isoform X6

    See identical proteins and their annotated locations for XP_002748785.1

    UniProtKB/TrEMBL
    A0A2R8PJQ7, F7HK99, U3BXQ2
    Related
    ENSCJAP00000026070.2
    Conserved Domains (1) summary
    pfam07818
    Location:119 → 210
    HCNGP; HCNGP-like protein

  7. XM_008997756.4 → XP_008996004.1  SAP30-binding protein isoform X7

    UniProtKB/TrEMBL
    A0A2R8PJQ7
    Conserved Domains (1) summary
    pfam07818
    Location:103 → 189
    HCNGP; HCNGP-like protein
Nucleotide Protein
Heading Accession and Version

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