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CUL1 cullin 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100395702, updated on 8-Mar-2024

Summary

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Gene symbol
CUL1
Gene description
cullin 1
See related
Ensembl:ENSCJAG00000010002
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Also known as
cullin-1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 8 NC_071449.1 (96193748..96299871, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 8 NC_048390.1 (97008773..97114993, complement)

Chromosome 8 - NC_071449.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S15-like Neighboring gene enhancer of zeste 2 polycomb repressive complex 2 subunit Neighboring gene U7 small nuclear RNA Neighboring gene uncharacterized LOC128928446 Neighboring gene uncharacterized LOC118143753

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cullin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071449.1 Reference mCalJa1.2.pat.X

    Range
    96193748..96299871 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035254495.2 → XP_035110386.1  cullin-1

    UniProtKB/TrEMBL
    A0A8I3WA20, A0A8I4A211, F7EQZ3, U3CZT1
    Conserved Domains (2) summary
    pfam00888
    Location:21 → 660
    Cullin; Cullin family
    pfam10557
    Location:706 → 767
    Cullin_Nedd8; Cullin protein neddylation domain

  2. XM_035254493.2 → XP_035110384.1  cullin-1

    UniProtKB/TrEMBL
    A0A8I3WA20, A0A8I4A211, F7EQZ3, U3CZT1
    Conserved Domains (2) summary
    pfam00888
    Location:21 → 660
    Cullin; Cullin family
    pfam10557
    Location:706 → 767
    Cullin_Nedd8; Cullin protein neddylation domain

  3. XM_035254492.2 → XP_035110383.1  cullin-1

    UniProtKB/TrEMBL
    A0A8I3WA20, A0A8I4A211, F7EQZ3, U3CZT1
    Conserved Domains (2) summary
    pfam00888
    Location:21 → 660
    Cullin; Cullin family
    pfam10557
    Location:706 → 767
    Cullin_Nedd8; Cullin protein neddylation domain

  4. XM_035254494.2 → XP_035110385.1  cullin-1

    UniProtKB/TrEMBL
    A0A8I3WA20, A0A8I4A211, F7EQZ3, U3CZT1
    Conserved Domains (2) summary
    pfam00888
    Location:21 → 660
    Cullin; Cullin family
    pfam10557
    Location:706 → 767
    Cullin_Nedd8; Cullin protein neddylation domain
Nucleotide Protein
Heading Accession and Version

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