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ATOH7 atonal bHLH transcription factor 7 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100393820, updated on 8-Mar-2024
Gene symbol
ATOH7
Gene description
atonal bHLH transcription factor 7
See related
Ensembl:ENSCJAG00000022261
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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See ATOH7 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 12 NC_071453.1 (58710694..58724819)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 12 NC_048394.1 (59500613..59548763)

Chromosome 12 - NC_071453.1Genomic Context describing neighboring genes Neighboring gene RUN and FYVE domain containing 2 Neighboring gene heterogeneous nuclear ribonucleoprotein H3 Neighboring gene phenazine biosynthesis like protein domain containing Neighboring gene myopalladin Neighboring gene thioredoxin domain-containing protein 5-like Neighboring gene HECT and RLD domain containing E3 ubiquitin protein ligase 4

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neural retina development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
transcription factor ATOH7
Names
atonal homolog 7

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071453.1 Reference mCalJa1.2.pat.X

    Range
    58710694..58724819
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009009857.4 → XP_009008105.1  transcription factor ATOH7

    See identical proteins and their annotated locations for XP_009008105.1

    UniProtKB/TrEMBL
    A0A2R8NEN1
    Related
    ENSCJAP00000040908.2
    Conserved Domains (1) summary
    cd19714
    Location:34 → 102
    bHLH_TS_ATOH7; basic helix-loop-helix (bHLH) domain found in protein atonal homolog 7 (ATOH7) and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials