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ATXN3 ataxin 3 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100393557, updated on 10-Feb-2026
Gene symbol
ATXN3
Gene description
ataxin 3
See related
Ensembl:ENSCJAG00000018025
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
all
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Try the new Transcripts and proteins table
See ATXN3 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2025_12 current calJac240_pri (GCF_049354715.1) 8 NC_133509.1 (126908397..126955401, complement)
RS_2023_03 previous assembly mCalJa1.2.pat.X (GCF_011100555.1) 10 NC_071451.1 (122794048..122841108, complement)

Chromosome 8 - NC_133509.1Genomic Context describing neighboring genes Neighboring gene fibulin 5 Neighboring gene transcription factor Sp3 pseudogene Neighboring gene thyroid hormone receptor interactor 11 Neighboring gene uncharacterized LOC128928861 Neighboring gene uncharacterized LOC144577459 Neighboring gene NADH:ubiquinone oxidoreductase subunit B1 Neighboring gene cleavage and polyadenylation specific factor 2

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
ataxin-3

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_049354715.1-RS_2025_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference calJac240_pri Primary Assembly

Genomic

  1. NC_133509.1 Reference calJac240_pri Primary Assembly

    Range
    126908397..126955401 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002754206.6 → XP_002754252.1  ataxin-3 isoform X1

    See identical proteins and their annotated locations for XP_002754252.1

    UniProtKB/TrEMBL
    F6SV02, F6SVL6
    Related
    ENSCJAP00000033381.2
    Conserved Domains (2) summary
    pfam02099
    Location:11 → 163
    Josephin; Josephin
    pfam16619
    Location:264 → 333
    SUIM_assoc; Unstructured region C-term to UIM in Ataxin3

  2. XM_035261300.3 → XP_035117191.1  ataxin-3 isoform X4

    UniProtKB/TrEMBL
    A0A2R8PDN5
    Conserved Domains (2) summary
    pfam02099
    Location:10 → 65
    Josephin
    pfam16619
    Location:165 → 236
    SUIM_assoc; Unstructured region C-term to UIM in Ataxin3

  3. XM_035261298.3 → XP_035117189.1  ataxin-3 isoform X2

    UniProtKB/TrEMBL
    A0A2R8PDN5, F6SVY6
    Conserved Domains (2) summary
    pfam02099
    Location:5 → 108
    Josephin
    pfam16619
    Location:208 → 279
    SUIM_assoc; Unstructured region C-term to UIM in Ataxin3

  4. XM_078335635.1 → XP_078191761.1  ataxin-3 isoform X4

    UniProtKB/TrEMBL
    A0A2R8PDN5

  5. XM_035261299.3 → XP_035117190.1  ataxin-3 isoform X3

    UniProtKB/TrEMBL
    F6T5Y3
    Conserved Domains (2) summary
    pfam02099
    Location:9 → 163
    Josephin
    pfam16619
    Location:263 → 291
    SUIM_assoc; Unstructured region C-term to UIM in Ataxin3
Nucleotide Protein
Heading Accession and Version

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