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FGFR1 fibroblast growth factor receptor 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100390192, updated on 3-Apr-2024

Summary

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Gene symbol
FGFR1
Gene description
fibroblast growth factor receptor 1
See related
Ensembl:ENSCJAG00000002394
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 13 NC_071454.1 (36109353..36169288, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 13 NC_048395.1 (36173396..36235415, complement)

Chromosome 13 - NC_071454.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128929433 Neighboring gene nuclear receptor binding SET domain protein 3 Neighboring gene ubiquitin-60S ribosomal protein L40-like Neighboring gene leucine zipper and EF-hand containing transmembrane protein 2 Neighboring gene uncharacterized LOC128929432 Neighboring gene 40S ribosomal protein S20-like Neighboring gene uncharacterized protein LINC03042 Neighboring gene uncharacterized LOC118146791

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fibroblast growth factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fibroblast growth factor receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fibroblast growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fibroblast growth factor receptor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071454.1 Reference mCalJa1.2.pat.X

    Range
    36109353..36169288 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054243849.1 → XP_054099824.1  fibroblast growth factor receptor 1 isoform X8

  2. XM_054243845.1 → XP_054099820.1  fibroblast growth factor receptor 1 isoform X4

  3. XM_008979350.4 → XP_008977598.2  fibroblast growth factor receptor 1 isoform X5

  4. XM_054243839.1 → XP_054099814.1  fibroblast growth factor receptor 1 isoform X1

  5. XM_054243852.1 → XP_054099827.1  fibroblast growth factor receptor 1 isoform X10

    UniProtKB/TrEMBL
    F7EMT5

  6. XM_054243847.1 → XP_054099822.1  fibroblast growth factor receptor 1 isoform X7

  7. XM_054243846.1 → XP_054099821.1  fibroblast growth factor receptor 1 isoform X6

  8. XM_054243844.1 → XP_054099819.1  fibroblast growth factor receptor 1 isoform X4

  9. XM_035270283.2 → XP_035126174.2  fibroblast growth factor receptor 1 isoform X5

  10. XM_054243843.1 → XP_054099818.1  fibroblast growth factor receptor 1 isoform X3

  11. XM_054243842.1 → XP_054099817.1  fibroblast growth factor receptor 1 isoform X2

  12. XM_054243838.1 → XP_054099813.1  fibroblast growth factor receptor 1 isoform X1

  13. XM_054243851.1 → XP_054099826.1  fibroblast growth factor receptor 1 isoform X10

    UniProtKB/TrEMBL
    F7EMT5

  14. XM_054243848.1 → XP_054099823.1  fibroblast growth factor receptor 1 isoform X8

  15. XM_054243853.1 → XP_054099828.1  fibroblast growth factor receptor 1 isoform X11

  16. XM_054243855.1 → XP_054099830.1  fibroblast growth factor receptor 1 isoform X13

  17. XM_054243854.1 → XP_054099829.1  fibroblast growth factor receptor 1 isoform X12

  18. XM_054243850.1 → XP_054099825.1  fibroblast growth factor receptor 1 isoform X9

  19. XM_054243840.1 → XP_054099815.1  fibroblast growth factor receptor 1 isoform X1

  20. XM_054243841.1 → XP_054099816.1  fibroblast growth factor receptor 1 isoform X1

Nucleotide Protein
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