U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ACSF3 acyl-CoA synthetase family member 3 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100389759, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ACSF3
Gene description
acyl-CoA synthetase family member 3
See related
Ensembl:ENSCJAG00000010928
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 20
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 20 NC_071461.1 (43372306..43447830)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 20 NC_048402.1 (44402229..44480043)

Chromosome 20 - NC_071461.1Genomic Context describing neighboring genes Neighboring gene uncharacterized PE-PGRS family protein PE_PGRS20-like Neighboring gene uncharacterized LOC128930311 Neighboring gene proteoglycan 4-like Neighboring gene cadherin 15

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables medium-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
malonate--CoA ligase ACSF3, mitochondrial
Names
acyl-CoA synthetase family member 3, mitochondrial

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071461.1 Reference mCalJa1.2.pat.X

    Range
    43372306..43447830
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008986380.4 → XP_008984628.3  malonate--CoA ligase ACSF3, mitochondrial isoform X2

  2. XM_008986382.4 → XP_008984630.3  malonate--CoA ligase ACSF3, mitochondrial isoform X3

  3. XM_054248741.1 → XP_054104716.1  malonate--CoA ligase ACSF3, mitochondrial isoform X1

  4. XM_054248744.1 → XP_054104719.1  malonate--CoA ligase ACSF3, mitochondrial isoform X1

  5. XM_035282575.2 → XP_035138466.2  malonate--CoA ligase ACSF3, mitochondrial isoform X3

  6. XM_054248742.1 → XP_054104717.1  malonate--CoA ligase ACSF3, mitochondrial isoform X1

  7. XM_054248743.1 → XP_054104718.1  malonate--CoA ligase ACSF3, mitochondrial isoform X1

  8. XM_054248745.1 → XP_054104720.1  malonate--CoA ligase ACSF3, mitochondrial isoform X1

RNA

  1. XR_004737467.2 RNA Sequence

  2. XR_615765.4 RNA Sequence

  3. XR_008478226.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.