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HTR2C 5-hydroxytryptamine receptor 2C [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100387477, updated on 14-Jul-2017

Summary

Gene symbol
HTR2C
Gene description
5-hydroxytryptamine receptor 2C
See related
Ensembl:ENSCJAG00000006967
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs

Genomic context

See HTR2C in Genome Data Viewer
Location:
chromosome: X
Exon count:
6
Annotation release Status Assembly Chr Location
104 current Callithrix jacchus-3.2 (GCF_000004665.1) X NC_013918.1 (103029436..103322890)

Chromosome X - NC_013918.1Genomic Context describing neighboring genes Neighboring gene SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) pseudogene Neighboring gene meiotic recombination protein REC114 pseudogene Neighboring gene heat shock cognate 71 kDa protein pseudogene Neighboring gene glutamate-rich protein 2-like Neighboring gene interleukin 13 receptor subunit alpha 2

Genomic regions, transcripts, and products

Genomic Sequence:
NC_013918.1 Chromosome X Reference Callithrix jacchus-3.2

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • Calcium signaling pathway, organism-specific biosystem (from KEGG)
    Calcium signaling pathway, organism-specific biosystemCa2+ that enters the cell from the outside is a principal source of signal Ca2+. Entry of Ca2+ is driven by the presence of a large electrochemical gradient across the plasma membrane. Cells use this...
  • Calcium signaling pathway, conserved biosystem (from KEGG)
    Calcium signaling pathway, conserved biosystemCa2+ that enters the cell from the outside is a principal source of signal Ca2+. Entry of Ca2+ is driven by the presence of a large electrochemical gradient across the plasma membrane. Cells use this...
  • Gap junction, organism-specific biosystem (from KEGG)
    Gap junction, organism-specific biosystemGap junctions contain intercellular channels that allow direct communication between the cytosolic compartments of adjacent cells. Each gap junction channel is formed by docking of two 'hemichannels'...
  • Gap junction, conserved biosystem (from KEGG)
    Gap junction, conserved biosystemGap junctions contain intercellular channels that allow direct communication between the cytosolic compartments of adjacent cells. Each gap junction channel is formed by docking of two 'hemichannels'...
  • Inflammatory mediator regulation of TRP channels, organism-specific biosystem (from KEGG)
    Inflammatory mediator regulation of TRP channels, organism-specific biosystemThe TRP channels that exhibit a unique response to temperature have been given the name thermo-TRPs. Among all thermo- TRP channels, TRPV1-4, TRPM8, and TRPA1 are expressed in subsets of nociceptive...
  • Inflammatory mediator regulation of TRP channels, conserved biosystem (from KEGG)
    Inflammatory mediator regulation of TRP channels, conserved biosystemThe TRP channels that exhibit a unique response to temperature have been given the name thermo-TRPs. Among all thermo- TRP channels, TRPV1-4, TRPM8, and TRPA1 are expressed in subsets of nociceptive...
  • Neuroactive ligand-receptor interaction, organism-specific biosystem (from KEGG)
    Neuroactive ligand-receptor interaction, organism-specific biosystem
    Neuroactive ligand-receptor interaction
  • Neuroactive ligand-receptor interaction, conserved biosystem (from KEGG)
    Neuroactive ligand-receptor interaction, conserved biosystem
    Neuroactive ligand-receptor interaction
  • Serotonergic synapse, organism-specific biosystem (from KEGG)
    Serotonergic synapse, organism-specific biosystemSerotonin (5-Hydroxytryptamine, 5-HT) is a monoamine neurotransmitter that plays important roles in physiological functions such as learning and memory, emotion, sleep, pain, motor function and endoc...

General protein information

Preferred Names
5-hydroxytryptamine receptor 2C

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Callithrix jacchus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Callithrix jacchus-3.2

Genomic

  1. NC_013918.1 Reference Callithrix jacchus-3.2

    Range
    103029436..103322890
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002763170.3XP_002763216.1  5-hydroxytryptamine receptor 2C

    UniProtKB/TrEMBL
    F6S1A5
    Related
    ENSCJAP00000012921.2, ENSCJAT00000013618.2
    Conserved Domains (2) summary
    pfam00001
    Location:73368
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:73243
    7tm_4; Olfactory receptor
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