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LOC100370954 uncharacterized LOC100370954 [ Saccoglossus kowalevskii ]

Gene ID: 100370954, updated on 19-Oct-2023

Summary

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Gene symbol
LOC100370954
Gene description
uncharacterized LOC100370954
See related
EnsemblRapid:LOC100370954
Gene type
protein coding
RefSeq status
MODEL
Organism
Saccoglossus kowalevskii
Lineage
Eukaryota; Metazoa; Hemichordata; Enteropneusta; Harrimaniidae; Saccoglossus
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Skow_1.1 (GCF_000003605.2) Unplaced Scaffold NW_003123406.1 (99743..169750)

NW_003123406.1Genomic Context describing neighboring genes Neighboring gene protein FAM207A-like Neighboring gene tubulin delta chain-like Neighboring gene ecdysone-induced protein 75B Neighboring gene uncharacterized LOC100371105

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003123406 unplaced scaffold reference Skow_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hormone-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC100370954

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saccoglossus kowalevskii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Skow_1.1 Primary Assembly

Genomic

  1. NW_003123406.1 Reference Skow_1.1 Primary Assembly

    Range
    99743..169750
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002734274.2 → XP_002734320.1  uncharacterized protein LOC100370954

    Related
    XP_002734320.1, XM_002734274.2
    Conserved Domains (2) summary
    cd06929
    Location:605 → 778
    NR_LBD_F1; Ligand-binding domain of nuclear receptor family 1
    cd06916
    Location:106 → 177
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
Nucleotide Protein
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Molecular Biology Databases
Research Materials