Pate2 prostate and testis expressed 2 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Pate2provided by RGD
Official Full Name: prostate and testis expressed 2provided by RGD
Primary source: RGD:2320100
See related: Ensembl:ENSRNOG00000033981 AllianceGenome:RGD:2320100
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Predicted to be active in extracellular space. Orthologous to human PATE2 (prostate and testis expressed 2). [provided by Alliance of Genome Resources, Jul 2025]
Expression: Biased expression in Testes (RPKM 1.8), Brain (RPKM 1.7) and 4 other tissues See more
Orthologs: all
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Genomic context

Location:: 8q21

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	8	NC_086026.1 (42271831..42283219)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	8	NC_051343.1 (34019123..34026850)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	8	NC_005107.4 (36772362..36879228)

Chromosome 8 - NC_086026.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

D8Rat189 (e-PCR), detects polymorphism
- UniSTS:228258

Gene Ontology Provided by RGD

Component	Evidence Code	Pubs
is_active_in extracellular region	IBA Inferred from Biological aspect of Ancestor more info
located_in extracellular region	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: prostate and testis expressed protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001267781.1 → NP_001254710.1 prostate and testis expressed protein 2

See identical proteins and their annotated locations for NP_001254710.1

Status: PROVISIONAL

Source sequence(s)

HQ687476

UniProtKB/TrEMBL

A0A8J8Y8A4, A0ABK0M5A0

Related

ENSRNOP00000112456.1, ENSRNOT00000167442.1

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

NC_086026.1 Reference GRCr8

Range

42271831..42283219

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_063264710.1 → XP_063120780.1 prostate and testis expressed protein 2 isoform X2

UniProtKB/TrEMBL

A6JYL2
XM_039080648.2 → XP_038936576.1 prostate and testis expressed protein 2 isoform X1