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Tmem91 transmembrane protein 91 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100359879, updated on 13-Aug-2019

Summary

Official Symbol
Tmem91provided by RGD
Official Full Name
transmembrane protein 91provided by RGD
Primary source
RGD:2323264
See related
Ensembl:ENSRNOG00000021302
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Brain (RPKM 24.4), Adrenal (RPKM 7.6) and 8 other tissues See more
Orthologs

Genomic context

See Tmem91 in Genome Data Viewer
Location:
1q21
Exon count:
6
Annotation release Status Assembly Chr Location
106 current Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (82463824..82471310, complement)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 1 NC_005100.3 (83722963..83731803, complement)

Chromosome 1 - NC_005100.4Genomic Context describing neighboring genes Neighboring gene branched chain keto acid dehydrogenase E1 subunit alpha Neighboring gene exosome component 5 Neighboring gene B9 domain containing 2 Neighboring gene transforming growth factor, beta 1

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General gene information

Markers

Homology

Gene Ontology Provided by RGD

Process Evidence Code Pubs
hematopoietic progenitor cell differentiation IEA
Inferred from Electronic Annotation
more info
 
hematopoietic progenitor cell differentiation ISO
Inferred from Sequence Orthology
more info
PubMed 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005100.4 Reference Rnor_6.0 Primary Assembly

    Range
    82463824..82471310 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002728716.5XP_002728762.3  transmembrane protein 91 isoform X1

    See identical proteins and their annotated locations for XP_002728762.3

    Conserved Domains (1) summary
    pfam04505
    Location:190255
    CD225; Interferon-induced transmembrane protein
  2. XM_006228522.3XP_006228584.1  transmembrane protein 91 isoform X2

    See identical proteins and their annotated locations for XP_006228584.1

    Conserved Domains (1) summary
    pfam04505
    Location:190222
    CD225; Interferon-induced transmembrane protein
  3. XM_006228526.2XP_006228588.1  transmembrane protein 91 isoform X3

    See identical proteins and their annotated locations for XP_006228588.1

    UniProtKB/TrEMBL
    D4A8D1
    Related
    ENSRNOP00000030003.4, ENSRNOT00000038300.4
    Conserved Domains (1) summary
    pfam04505
    Location:92157
    CD225; Interferon-induced transmembrane protein
  4. XM_006228525.2XP_006228587.1  transmembrane protein 91 isoform X3

    See identical proteins and their annotated locations for XP_006228587.1

    UniProtKB/TrEMBL
    D4A8D1
    Conserved Domains (1) summary
    pfam04505
    Location:92157
    CD225; Interferon-induced transmembrane protein
  5. XM_017590020.1XP_017445509.1  transmembrane protein 91 isoform X3

    UniProtKB/TrEMBL
    D4A8D1
    Conserved Domains (1) summary
    pfam04505
    Location:92157
    CD225; Interferon-induced transmembrane protein

Alternate Rn_Celera

Genomic

  1. AC_000069.1 Alternate Rn_Celera

    Range
    75619219..75626621 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002725551.4XP_002725597.3  transmembrane protein 91 isoform X1

    See identical proteins and their annotated locations for XP_002725597.3

    Conserved Domains (1) summary
    pfam04505
    Location:190255
    CD225; Interferon-induced transmembrane protein
  2. XM_006223140.3XP_006223202.1  transmembrane protein 91 isoform X2

    See identical proteins and their annotated locations for XP_006223202.1

    Conserved Domains (1) summary
    pfam04505
    Location:190222
    CD225; Interferon-induced transmembrane protein
  3. XM_006223144.2XP_006223206.1  transmembrane protein 91 isoform X3

    See identical proteins and their annotated locations for XP_006223206.1

    UniProtKB/TrEMBL
    D4A8D1
    Conserved Domains (1) summary
    pfam04505
    Location:92157
    CD225; Interferon-induced transmembrane protein
  4. XM_006223143.2XP_006223205.1  transmembrane protein 91 isoform X3

    See identical proteins and their annotated locations for XP_006223205.1

    UniProtKB/TrEMBL
    D4A8D1
    Conserved Domains (1) summary
    pfam04505
    Location:92157
    CD225; Interferon-induced transmembrane protein
  5. XM_017588844.1XP_017444333.1  transmembrane protein 91 isoform X3

    UniProtKB/TrEMBL
    D4A8D1
    Conserved Domains (1) summary
    pfam04505
    Location:92157
    CD225; Interferon-induced transmembrane protein
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