U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

YIPF5 Yip1 domain family member 5 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100357301, updated on 2-Dec-2024
Gene symbol
YIPF5
Gene description
Yip1 domain family member 5
See related
Ensembl:ENSOCUG00000028126
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
all
Try the new Gene page
Try the new Transcripts and proteins table
See YIPF5 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_11 current mOryCun1.1 (GCF_964237555.1) 6 NC_091437.1 (31604124..31623019, complement)
RS_2023_02 previous assembly UM_NZW_1.0 (GCF_009806435.1) 3 NC_067376.1 (26008450..26030012, complement)

Chromosome 6 - NC_091437.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC138850175 Neighboring gene uncharacterized LOC103347907 Neighboring gene uncharacterized LOC108176570 Neighboring gene ribonuclease P protein subunit p14-like Neighboring gene potassium channel tetramerization domain containing 16 Neighboring gene uncharacterized LOC127490517

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. YIPF5 (p.W218R) mutation induced primary microcephaly in rabbits. Liu X, et al. Neurobiol Dis, 2023 Jun 15. PMID 37142085
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. YIPF5 (p.W218R) mutation induced primary microcephaly in rabbits.
    Title: YIPF5 (p.W218R) mutation induced primary microcephaly in rabbits.
Submit: New GeneRIF Correction

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of ER to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion with Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
protein YIPF5

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_964237555.1-RS_2024_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOryCun1.1

Genomic

  1. NC_091437.1 Reference mOryCun1.1

    Range
    31604124..31623019 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002710278.5 → XP_002710324.1  protein YIPF5

    UniProtKB/TrEMBL
    G1TR00
    Related
    ENSOCUP00000019447.2
    Conserved Domains (1) summary
    cl21557
    Location:42 → 257
    Yip1; Yip1 domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials