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CLCF1 cardiotrophin like cytokine factor 1 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100356265, updated on 20-Feb-2025
Gene symbol
CLCF1
Gene description
cardiotrophin like cytokine factor 1
See related
Ensembl:ENSOCUG00000003943
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
all
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See CLCF1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_11 current mOryCun1.1 (GCF_964237555.1) 1 NC_091432.1 (4666003..4674496)
RS_2023_02 previous assembly UM_NZW_1.0 (GCF_009806435.1) 1 NC_067374.1 (208529775..208539414, complement)

Chromosome 1 - NC_091432.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 10C Neighboring gene protein phosphatase 1 catalytic subunit alpha Neighboring gene RAD9 checkpoint clamp component A Neighboring gene DNA polymerase delta 4, accessory subunit Neighboring gene uncharacterized LOC138847868 Neighboring gene slingshot protein phosphatase 3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway via JAK-STAT IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of B cell proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of tyrosine phosphorylation of STAT protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CNTFR-CLCF1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of CRLF-CLCF1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
cardiotrophin-like cytokine factor 1

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RefSeqs of Annotated Genomes: GCF_964237555.1-RS_2024_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOryCun1.1

Genomic

  1. NC_091432.1 Reference mOryCun1.1

    Range
    4666003..4674496
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002709238.5 → XP_002709284.3  cardiotrophin-like cytokine factor 1 isoform X1

    UniProtKB/TrEMBL
    G1SKR8

  2. XM_051826737.2 → XP_051682697.1  cardiotrophin-like cytokine factor 1 isoform X2

    UniProtKB/TrEMBL
    A0A5F9CNY0

  3. XM_017347019.3 → XP_017202508.1  cardiotrophin-like cytokine factor 1 isoform X3

    Conserved Domains (1) summary
    cl21565
    Location:46 → 202
    LIF_OSM; LIF / OSM family
Nucleotide Protein
Heading Accession and Version

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