U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

USH2A usherin [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100355962, updated on 2-Dec-2024
Gene symbol
USH2A
Gene description
usherin
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
all
Try the new Gene page
Try the new Transcripts and proteins table
See USH2A in Genome Data Viewer
Location:
chromosome: 13
Exon count:
74
Annotation release Status Assembly Chr Location
RS_2024_11 current mOryCun1.1 (GCF_964237555.1) 13 NC_091444.1 (29820360..30668600, complement)
RS_2023_02 previous assembly UM_NZW_1.0 (GCF_009806435.1) 16 NC_067389.1 (27830424..28662228, complement)

Chromosome 13 - NC_091444.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC138844865 Neighboring gene potassium channel tetramerization domain containing 3 Neighboring gene uncharacterized LOC138844948 Neighboring gene estrogen related receptor gamma Neighboring gene U6 spliceosomal RNA

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in animal organ morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
usherin
Names
Usher syndrome 2A (autosomal recessive, mild)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_964237555.1-RS_2024_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOryCun1.1

Genomic

  1. NC_091444.1 Reference mOryCun1.1

    Range
    29820360..30668600 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_070055318.1 → XP_069911419.1  usherin isoform X2

  2. XM_008268426.4 → XP_008266648.3  usherin isoform X3

  3. XM_070055317.1 → XP_069911418.1  usherin isoform X1

  4. XM_070055319.1 → XP_069911420.1  usherin isoform X4

  5. XM_070055320.1 → XP_069911421.1  usherin isoform X5

RNA

  1. XR_011381453.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials