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XPC XPC complex subunit, DNA damage recognition and repair factor [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100346279, updated on 2-Dec-2024

Summary

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Gene symbol
XPC
Gene description
XPC complex subunit, DNA damage recognition and repair factor
See related
Ensembl:ENSOCUG00000011079
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See XPC in Genome Data Viewer
Location:
chromosome: 10
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_11 current mOryCun1.1 (GCF_964237555.1) 10 NC_091441.1 (113085568..113113731, complement)
RS_2023_02 previous assembly UM_NZW_1.0 (GCF_009806435.1) 9 NC_067382.1 (106266954..106296347)

Chromosome 10 - NC_091441.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC138844137 Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 4 Neighboring gene transmembrane protein 43 Neighboring gene LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated Neighboring gene solute carrier family 6 member 6 Neighboring gene glutamate receptor interacting protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mismatch repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of XPC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nucleotide-excision repair factor 2 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA repair protein complementing XP-C cells
Names
xeroderma pigmentosum, complementation group C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_964237555.1-RS_2024_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOryCun1.1

Genomic

  1. NC_091441.1 Reference mOryCun1.1

    Range
    113085568..113113731 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008260364.4 → XP_008258586.4  DNA repair protein complementing XP-C cells isoform X1

  2. XM_051851768.2 → XP_051707728.2  DNA repair protein complementing XP-C cells isoform X2

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials