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EME1 essential meiotic structure-specific endonuclease 1 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100341377, updated on 10-Oct-2024

Summary

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Gene symbol
EME1
Gene description
essential meiotic structure-specific endonuclease 1
See related
Ensembl:ENSOCUG00000004604
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See EME1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 19 NC_067392.1 (34879170..34888002, complement)

Chromosome 17 - NC_091448.1Genomic Context describing neighboring genes Neighboring gene tachykinin precursor 4 Neighboring gene xylosyltransferase 2 Neighboring gene mitochondrial ribosomal protein L27 Neighboring gene radical S-adenosyl methionine domain containing 1 Neighboring gene MYCBP associated protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067392.1 Chromosome 19 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic intra-S DNA damage checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in replication fork processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in resolution of meiotic recombination intermediates IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Holliday junction resolvase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
crossover junction endonuclease EME1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067392.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    34879170..34888002 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008271302.3 → XP_008269524.1  crossover junction endonuclease EME1

    UniProtKB/TrEMBL
    A0A5F9C0P7
    Related
    ENSOCUP00000027259.1
    Conserved Domains (1) summary
    pfam02732
    Location:260 → 429
    ERCC4; ERCC4 domain

  2. XM_051825555.1 → XP_051681515.1  crossover junction endonuclease EME1

  3. XM_051825557.1 → XP_051681517.1  crossover junction endonuclease EME1

  4. XM_051825556.1 → XP_051681516.1  crossover junction endonuclease EME1

Nucleotide Protein
Heading Accession and Version

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