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RCAN1 regulator of calcineurin 1 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100339855, updated on 2-Dec-2024

Summary

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Gene symbol
RCAN1
Gene description
regulator of calcineurin 1
See related
Ensembl:ENSOCUG00000010604
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See RCAN1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_11 current mOryCun1.1 (GCF_964237555.1) 4 NC_091435.1 (10465008..10550436)
RS_2023_02 previous assembly UM_NZW_1.0 (GCF_009806435.1) Unplaced Scaffold NW_026259175.1 (4777470..4860883)

Chromosome 4 - NC_091435.1Genomic Context describing neighboring genes Neighboring gene RUNX family transcription factor 1 Neighboring gene uncharacterized LOC127487592 Neighboring gene chloride intracellular channel 6 Neighboring gene uncharacterized LOC127487595 Neighboring gene potassium voltage-gated channel subfamily E regulatory subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-dependent protein serine/threonine phosphatase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcipressin-1
Names
calcipressin 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_964237555.1-RS_2024_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOryCun1.1

Genomic

  1. NC_091435.1 Reference mOryCun1.1

    Range
    10465008..10550436
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051833615.2 → XP_051689575.1  calcipressin-1 isoform X1

  2. XM_002721299.5 → XP_002721345.1  calcipressin-1 isoform X2

    UniProtKB/TrEMBL
    G1SZM7
    Related
    ENSOCUP00000009139.2
    Conserved Domains (1) summary
    pfam04847
    Location:23 → 190
    Calcipressin; Calcipressin
Nucleotide Protein
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Molecular Biology Databases
Research Materials