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CSTF3 cleavage stimulation factor subunit 3 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100339047, updated on 8-Mar-2024

Summary

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Gene symbol
CSTF3
Gene description
cleavage stimulation factor subunit 3
See related
Ensembl:ENSOCUG00000015417
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 1 NC_067374.1 (186238174..186327959, complement)

Chromosome 1 - NC_067374.1Genomic Context describing neighboring genes Neighboring gene glutamine and serine rich 1 Neighboring gene DEP domain containing 7 Neighboring gene 60S ribosomal protein L9 Neighboring gene t-complex 11 like 1 Neighboring gene nucleophosmin-like Neighboring gene small nucleolar RNA SNORD42 Neighboring gene homeodomain interacting protein kinase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067374.1 Chromosome 1 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cleavage stimulation factor subunit 3
Names
cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067374.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    186238174..186327959 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002709039.4 → XP_002709085.1  cleavage stimulation factor subunit 3

    UniProtKB/TrEMBL
    G1T9E3
    Related
    ENSOCUP00000013248.2
    Conserved Domains (4) summary
    smart00386
    Location:45 → 77
    HAT; HAT (Half-A-TPR) repeats
    COG5107
    Location:2 → 515
    RNA14; Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification]
    sd00006
    Location:31 → 60
    TPR; TPR repeat [structural motif]
    pfam05843
    Location:375 → 649
    Suf; Suppressor of forked protein (Suf)

RNA

  1. XR_001794415.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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