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KAT7 lysine acetyltransferase 7 [ Sus scrofa (pig) ]

Gene ID: 100337667, updated on 8-Mar-2024

Summary

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Official Symbol
KAT7provided by VGNC
Official Full Name
lysine acetyltransferase 7provided by VGNC
Primary source
VGNC:VGNC:89307
See related
Ensembl:ENSSSCG00000017553
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Also known as
MYST2
Expression
Ubiquitous expression in ovary (RPKM 31.2), kidney (RPKM 10.0) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
16
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 12 NC_010454.4 (25970966..26005006)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 12 NC_010454.3 (25975192..26009289)

Chromosome 12 - NC_010454.4Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member B1 Neighboring gene family with sequence similarity 117 member A Neighboring gene tachykinin precursor 4 Neighboring gene distal-less homeobox 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. Molecular characterization, polymorphism and association of porcine MYST2 gene. Yong WJ, et al. Mol Biol Rep, 2012 Jul. PMID 22327654
  2. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
  3. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone acetyltransferase KAT7
Names
MYST histone acetyltransferase 2
NP_001182288.1
XP_005668922.1
XP_005668923.1
XP_005668924.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001195359.1 → NP_001182288.1  histone acetyltransferase KAT7

    See identical proteins and their annotated locations for NP_001182288.1

    Status: PROVISIONAL

    Source sequence(s)
    GU373686
    UniProtKB/TrEMBL
    A0A4X1UNN0, D3K5K8
    Related
    ENSSSCP00000072955.1, ENSSSCT00000077684.1
    Conserved Domains (3) summary
    pfam01530
    Location:184 → 210
    zf-C2HC; Zinc finger, C2HC type
    pfam01853
    Location:393 → 571
    MOZ_SAS; MOZ/SAS family
    cl17182
    Location:329 → 607
    NAT_SF; N-Acyltransferase superfamily: Various enyzmes that characteristicly catalyze the transfer of an acyl group to a substrate

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010454.4 Reference Sscrofa11.1 Primary Assembly

    Range
    25970966..26005006
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005668867.3 → XP_005668924.1  histone acetyltransferase KAT7 isoform X3

    See identical proteins and their annotated locations for XP_005668924.1

    UniProtKB/TrEMBL
    A0A4X1UNP1, A0A8D0TF71, A0A8D0ZA13, M3VK28
    Related
    ENSSSCP00000018601.3, ENSSSCT00000019107.6
    Conserved Domains (3) summary
    pfam01530
    Location:184 → 210
    zf-C2HC; Zinc finger, C2HC type
    pfam01853
    Location:363 → 541
    MOZ_SAS; MOZ/SAS family
    cl17182
    Location:299 → 577
    NAT_SF; N-Acyltransferase superfamily: Various enyzmes that characteristicly catalyze the transfer of an acyl group to a substrate

  2. XM_005668866.3 → XP_005668923.1  histone acetyltransferase KAT7 isoform X2

    UniProtKB/TrEMBL
    A0A8D1ID77
    Related
    ENSSSCP00000062579.2, ENSSSCT00000086137.2
    Conserved Domains (3) summary
    pfam01530
    Location:190 → 216
    zf-C2HC; Zinc finger, C2HC type
    pfam01853
    Location:369 → 547
    MOZ_SAS; MOZ/SAS family
    cl17182
    Location:305 → 583
    NAT_SF; N-Acyltransferase superfamily: Various enyzmes that characteristicly catalyze the transfer of an acyl group to a substrate

  3. XM_005668865.3 → XP_005668922.1  histone acetyltransferase KAT7 isoform X1

    UniProtKB/TrEMBL
    A0A8D0TG06, A0A8D1T3L7
    Conserved Domains (3) summary
    pfam01530
    Location:190 → 216
    zf-C2HC; Zinc finger, C2HC type
    pfam01853
    Location:399 → 577
    MOZ_SAS; MOZ/SAS family
    cl17182
    Location:335 → 613
    NAT_SF; N-Acyltransferase superfamily: Various enyzmes that characteristicly catalyze the transfer of an acyl group to a substrate
Nucleotide Protein Strain
Heading Accession and Version

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