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galnt3 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3) [ Danio rerio (zebrafish) ]

Gene ID: 100331984, updated on 9-Sep-2025
Official Symbol
galnt3provided by ZNC
Official Full Name
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)provided by ZNC
Primary source
ZFIN:ZDB-GENE-120313-1
See related
Ensembl:ENSDARG00000108649 AllianceGenome:ZFIN:ZDB-GENE-120313-1
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Orthologous to human GALNT3 (polypeptide N-acetylgalactosaminyltransferase 3). [provided by Alliance of Genome Resources, Jul 2025]
Orthologs
human mouse all
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Location:
chromosome: 9
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2025_04 current GRCz12tu (GCF_049306965.1) 9 NC_133184.1 (51670729..51715431, complement)
RS_2024_08 previous assembly GRCz11 (GCF_000002035.6) 9 NC_007120.7 (49761847..49803858, complement)

Chromosome 9 - NC_133184.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC141376218 Neighboring gene xin actin binding repeat containing 2b Neighboring gene cysteine-serine-rich nuclear protein 3 Neighboring gene uncharacterized LOC141376219 Neighboring gene tetratricopeptide repeat domain 21B Neighboring gene uncharacterized LOC141376220 Neighboring gene uncharacterized LOC137496435

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Related articles in PubMed

  1. Giantin-knockout models reveal a feedback loop between Golgi function and glycosyltransferase expression. Stevenson NL, et al. J Cell Sci, 2017 Dec 15. PMID 29093022, Free PMC Article
  2. Galnt3, an enzyme engaged in protein glycosylation modification, is essential for the maintaining of intestinal health in zebrafish. Gao J, et al. Fish Shellfish Immunol, 2025 Aug. PMID 40306380
  3. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  4. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3); polypeptide N-acetylgalactosaminyltransferase 3

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RefSeqs of Annotated Genomes: GCF_049306965.1-RS_2025_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz12tu Primary Assembly

Genomic

  1. NC_133184.1 Reference GRCz12tu Primary Assembly

    Range
    51670729..51715431 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021479042.3 → XP_021334717.1  polypeptide N-acetylgalactosaminyltransferase 3

    UniProtKB/TrEMBL
    A0A8M9PT54
    Related
    ENSDARP00000143444.2
    Conserved Domains (2) summary
    cd02510
    Location:182 → 487
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:500 → 622
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein Strain
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