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ANKRD61 ankyrin repeat domain 61 [ Homo sapiens (human) ]

Gene ID: 100310846, updated on 13-May-2022

Summary

Official Symbol
ANKRD61provided by HGNC
Official Full Name
ankyrin repeat domain 61provided by HGNC
Primary source
HGNC:HGNC:22467
See related
Ensembl:ENSG00000157999 AllianceGenome:HGNC:22467
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Located in nucleoplasm. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in testis (RPKM 3.5), bone marrow (RPKM 1.7) and 12 other tissues See more
Orthologs
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Genomic context

See ANKRD61 in Genome Data Viewer
Location:
7p22.1
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (6031376..6036552)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (6149151..6154327)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (6071007..6076183)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene PMS1 homolog 2, mismatch repair system component Neighboring gene aminoacyl tRNA synthetase complex interacting multifunctional protein 2 Neighboring gene small nucleolar RNA, H/ACA box 80D Neighboring gene eukaryotic translation initiation factor 2 alpha kinase 1 Neighboring gene RNA, 7SL, cytoplasmic 851, pseudogene Neighboring gene RNA, U6 small nuclear 218, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Homology

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in nucleoplasm IDA
Inferred from Direct Assay
more info
 

General protein information

Preferred Names
ankyrin repeat domain-containing protein 61

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001271700.2NP_001258629.1  ankyrin repeat domain-containing protein 61

    See identical proteins and their annotated locations for NP_001258629.1

    Status: VALIDATED

    Source sequence(s)
    AC005995, AI221268
    Consensus CDS
    CCDS64590.1
    UniProtKB/Swiss-Prot
    A6NGH8
    Related
    ENSP00000386502.1, ENST00000409061.2
    Conserved Domains (5) summary
    cd00204
    Location:166298
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:172275
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:263317
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:169198
    ANK; ANK repeat [structural motif]
    cl02529
    Location:32115
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    6031376..6036552
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    6149151..6154327
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)