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CHMP4BP1 charged multivesicular body protein 4B pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 100307126, updated on 22-Sep-2022

Summary

Official Symbol
CHMP4BP1provided by HGNC
Official Full Name
charged multivesicular body protein 4B pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:43616
See related
AllianceGenome:HGNC:43616
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to be involved in late endosome to vacuole transport via multivesicular body sorting pathway and vesicle budding from membrane. Predicted to be part of ESCRT III complex. Predicted to be active in cytoplasmic side of plasma membrane and multivesicular body. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See CHMP4BP1 in Genome Data Viewer
Location:
14q22.3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (55298608..55299496)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (49503832..49504720)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (55765326..55766214)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene FBXO34 antisense RNA 1 Neighboring gene F-box protein 34 Neighboring gene ribosomal protein L34 pseudogene 28 Neighboring gene autophagy related 14 Neighboring gene high mobility group nucleosome binding domain 1 pseudogene 1 Neighboring gene ribosomal protein L21 pseudogene 6

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in autophagosome maturation IEA
Inferred from Electronic Annotation
more info
 
involved_in endosome to lysosome transport IEA
Inferred from Electronic Annotation
more info
 
involved_in late endosome to lysosome transport IEA
Inferred from Electronic Annotation
more info
 
involved_in late endosome to vacuole transport via multivesicular body sorting pathway IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in membrane fission IEA
Inferred from Electronic Annotation
more info
 
involved_in midbody abscission IEA
Inferred from Electronic Annotation
more info
 
involved_in mitotic metaphase plate congression IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of cell death IEA
Inferred from Electronic Annotation
more info
 
involved_in nuclear membrane reassembly IEA
Inferred from Electronic Annotation
more info
 
involved_in plasma membrane repair IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of mitotic spindle assembly IEA
Inferred from Electronic Annotation
more info
 
involved_in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in vesicle budding from membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in viral budding from plasma membrane IEA
Inferred from Electronic Annotation
more info
 
involved_in viral budding via host ESCRT complex IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of ESCRT III complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in amphisome membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in cytoplasmic side of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in kinetochore IEA
Inferred from Electronic Annotation
more info
 
located_in kinetochore microtubule IEA
Inferred from Electronic Annotation
more info
 
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 
located_in midbody IEA
Inferred from Electronic Annotation
more info
 
is_active_in multivesicular body IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in multivesicular body membrane IEA
Inferred from Electronic Annotation
more info
 
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_013059.2 

    Range
    101..989
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    55298608..55299496
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    49503832..49504720
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)