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ZEB2-AS1 ZEB2 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100303491, updated on 23-Nov-2021

Summary

Official Symbol
ZEB2-AS1provided by HGNC
Official Full Name
ZEB2 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:37149
See related
Ensembl:ENSG00000238057
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ZEB2AS; ZEB2-AS; ZEB2NAT
Summary
This gene produces a spliced long non-coding RNA which is a natural antisense transcript corresponding to the 5' UTR of zinc finger E-box binding homeobox 2 (ZEB2). It is thought that this transcript may be involved in the regulation of ZEB2 expression, and may play a role in the progression of bladder cancer. [provided by RefSeq, Aug 2015]
Expression
Ubiquitous expression in bone marrow (RPKM 12.1), brain (RPKM 10.2) and 23 other tissues See more
Orthologs
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Genomic context

See ZEB2-AS1 in Genome Data Viewer
Location:
2q22.3
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (144519614..144520899)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (145277181..145278466)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene zinc finger E-box binding homeobox 2 Neighboring gene Sharpr-MPRA regulatory region 3137 Neighboring gene VISTA enhancer hs407 Neighboring gene long intergenic non-protein coding RNA 1412 Neighboring gene long intergenic non-protein coding RNA 2993 Neighboring gene VISTA enhancer hs1802

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Homology

Other Names

  • ZEB2 antisense RNA 1 (non-protein coding)
  • ZEB2 natural antisense transcript

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_040248.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BE048858
    Related
    ENST00000428623.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    144519614..144520899
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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