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SCN10A sodium voltage-gated channel alpha subunit 10 [ Bos taurus (cattle) ]

Gene ID: 100299477, updated on 4-Jul-2020

Summary

Official Symbol
SCN10Aprovided by VGNC
Official Full Name
sodium voltage-gated channel alpha subunit 10provided by VGNC
Primary source
VGNC:VGNC:34343
See related
Ensembl:ENSBTAG00000046911
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See SCN10A in Genome Data Viewer
Location:
chromosome: 22
Exon count:
27
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 22 NC_037349.1 (12105557..12195313, complement)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 22 AC_000179.1 (12145051..12234035, complement)

Chromosome 22 - NC_037349.1Genomic Context describing neighboring genes Neighboring gene exo/endonuclease G Neighboring gene sodium voltage-gated channel alpha subunit 5 Neighboring gene U6 spliceosomal RNA Neighboring gene sodium voltage-gated channel alpha subunit 11 Neighboring gene uncharacterized LOC112443505

Genomic regions, transcripts, and products

General gene information

Markers

Homology

General protein information

Preferred Names
sodium channel protein type 10 subunit alpha
Names
sodium channel, voltage-gated, type X, alpha subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037349.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    12105557..12195313 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015459489.2XP_015314975.1  sodium channel protein type 10 subunit alpha

    Related
    ENSBTAP00000054657.2, ENSBTAT00000065485.2
    Conserved Domains (5) summary
    cd13433
    Location:14201472
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:11781428
    Ion_trans; Ion transport protein
    pfam06512
    Location:9061148
    Na_trans_assoc; Sodium ion transport-associated
    pfam11933
    Location:500555
    Na_trans_cytopl; Cytoplasmic domain of voltage-gated Na+ ion channel
    pfam16905
    Location:17431800
    GPHH; Voltage-dependent L-type calcium channel, IQ-associated
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