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KCNIP2-AS1 KCNIP2 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100289509, updated on 23-Nov-2021

Summary

Official Symbol
KCNIP2-AS1provided by HGNC
Official Full Name
KCNIP2 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:48680
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in fat (RPKM 44.1), heart (RPKM 17.8) and 2 other tissues See more
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Genomic context

See KCNIP2-AS1 in Genome Data Viewer
Location:
10q24.32
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 10 NC_000010.11 (101819068..101828889)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (103578825..103588646)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene VISTA enhancer hs513 Neighboring gene nucleophosmin/nucleoplasmin 3 Neighboring gene O-GlcNAcase Neighboring gene Sharpr-MPRA regulatory region 4495 Neighboring gene Sharpr-MPRA regulatory region 3638 Neighboring gene uncharacterized LOC107984029 Neighboring gene potassium voltage-gated channel interacting protein 2 Neighboring gene armadillo like helical domain containing 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045118.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AI125777, BX090826, DB457968

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p13 Primary Assembly

    Range
    101819068..101828889
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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