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DNAJC3-DT DNAJC3 divergent transcript [ Homo sapiens (human) ]

Gene ID: 100289274, updated on 12-Oct-2019

Summary

Official Symbol
DNAJC3-DTprovided by HGNC
Official Full Name
DNAJC3 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:39808
See related
Ensembl:ENSG00000247400
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
DNAJC3-AS1
Expression
Broad expression in thyroid (RPKM 4.8), testis (RPKM 2.7) and 24 other tissues See more

Genomic context

See DNAJC3-DT in Genome Data Viewer
Location:
13q32.1
Exon count:
2
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 13 NC_000013.11 (95672835..95676925, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (96325089..96329080, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene claudin 10 Neighboring gene Sharpr-MPRA regulatory region 5370 Neighboring gene Sharpr-MPRA regulatory region 2339 Neighboring gene DAZ interacting zinc finger protein 1 Neighboring gene DnaJ heat shock protein family (Hsp40) member C3 Neighboring gene MT-ND6 pseudogene 18 Neighboring gene MT-ND5 pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • DNAJC3 antisense RNA 1 (head to head)
  • DNAJC3 antisense RNA 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_132117.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL138955
    Related
    ENST00000499499.2

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20190905

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p13 Primary Assembly

    Range
    95672835..95676925 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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