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TMEM238L transmembrane protein 238 like [ Homo sapiens (human) ]

Gene ID: 100289255, updated on 4-Apr-2019

Summary

Official Symbol
TMEM238Lprovided by HGNC
Official Full Name
transmembrane protein 238 likeprovided by HGNC
Primary source
HGNC:HGNC:44356
See related
Ensembl:ENSG00000263429
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LINC00675
Expression
Biased expression in stomach (RPKM 20.3), colon (RPKM 18.5) and 6 other tissues See more

Genomic context

See TMEM238L in Genome Data Viewer
Location:
17p13.1-p12
Exon count:
2
Annotation release Status Assembly Chr Location
109 current GRCh38.p12 (GCF_000001405.38) 17 NC_000017.11 (10794913..10804099, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (10698230..10707416, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene ADP-ribose/CDP-alcohol diphosphatase, manganese dependent Neighboring gene transmembrane protein 220 Neighboring gene mago homolog 2, pseudogene Neighboring gene TMEM220 antisense RNA 1 Neighboring gene phosphoinositide interacting regulator of transient receptor potential channels Neighboring gene RNA, U6 small nuclear 1065, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Other Names

  • long intergenic non-protein coding RNA 675
  • putative transmembrane protein LOC100289255

Clone Names

  • FLJ21244

Gene Ontology Provided by GOA

Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_036581.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC015908, BC015790, BM924455, DA425830
    Related
    ENST00000581851.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p12 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p12 Primary Assembly

    Range
    10794913..10804099 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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