Format

Send to:

Choose Destination

GNG12-AS1 GNG12, DIRAS3 and WLS antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100289178, updated on 23-Nov-2021

Summary

Official Symbol
GNG12-AS1provided by HGNC
Official Full Name
GNG12, DIRAS3 and WLS antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:43938
See related
Ensembl:ENSG00000232284 MIM:615406
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in gall bladder (RPKM 1.2), prostate (RPKM 1.1) and 24 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See GNG12-AS1 in Genome Data Viewer
Location:
1p31.3
Exon count:
10
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (67832288..68202987)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (68297971..68668670)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene G protein subunit gamma 12 Neighboring gene Sharpr-MPRA regulatory region 6160 Neighboring gene Sharpr-MPRA regulatory region 9183 Neighboring gene sirtuin 5 pseudogene Neighboring gene ARL5A pseudogene 3 Neighboring gene DIRAS family GTPase 3 Neighboring gene Sharpr-MPRA regulatory region 5584 Neighboring gene Wnt ligand secretion mediator Neighboring gene CTBP2 pseudogene 8 Neighboring gene microRNA 1262 Neighboring gene ribosomal protein S7 pseudogene 4 Neighboring gene cytochrome c oxidase subunit 6B1 pseudogene 7

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Phenotypes

EBI GWAS Catalog

Description
Genome-wide association study of chemotherapeutic agent-induced severe neutropenia/leucopenia for patients in Biobank Japan.
EBI GWAS Catalog
Genome-wide meta-analysis identifies 56 bone mineral density loci and reveals 14 loci associated with risk of fracture.
EBI GWAS Catalog
Multistage genome-wide association meta-analyses identified two new loci for bone mineral density.
EBI GWAS Catalog
Twenty bone-mineral-density loci identified by large-scale meta-analysis of genome-wide association studies.
EBI GWAS Catalog

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • GNG12 antisense RNA 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_040077.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK124028, AL513284, DB291468
    Related
    ENST00000420587.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    67832288..68202987
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center