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FRG1CP FSHD region gene 1 family member C, pseudogene [ Homo sapiens (human) ]

Gene ID: 100289097, updated on 19-Jul-2022

Summary

Official Symbol
FRG1CPprovided by HGNC
Official Full Name
FSHD region gene 1 family member C, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:51762
See related
Ensembl:ENSG00000282826 AllianceGenome:HGNC:51762
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in gall bladder (RPKM 12.8), small intestine (RPKM 10.9) and 25 other tissues See more
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Genomic context

See FRG1CP in Genome Data Viewer
Location:
20q11.1
Exon count:
9
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (28580633..28602665, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (29562016..29584048)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124904967 Neighboring gene MIR663A host gene Neighboring gene microRNA 663a Neighboring gene RNA, 5.8S ribosomal pseudogene Neighboring gene FSHD region gene 1 family member D, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_132315.1 RNA Sequence

    Status: INFERRED

    Source sequence(s)
    ABBA01014710
    Related
    ENST00000358464.11

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    28580633..28602665 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    29562016..29584048
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)