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CRIM1-DT CRIM1 divergent transcript [ Homo sapiens (human) ]

Gene ID: 100288911, updated on 24-Jul-2021

Summary

Official Symbol
CRIM1-DTprovided by HGNC
Official Full Name
CRIM1 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:54057
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in fat (RPKM 5.5), brain (RPKM 5.1) and 23 other tissues See more
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Genomic context

See CRIM1-DT in Genome Data Viewer
Location:
2p22.2
Exon count:
2
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (36354749..36355570, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (36581892..36582713, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene ribosomal protein L21 pseudogene 36 Neighboring gene meiotic recombination hotspot M Neighboring gene cysteine rich transmembrane BMP regulator 1 Neighboring gene fasciculation and elongation protein zeta 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

Associated conditions

Description Tests
Genome-wide association study combining pathway analysis for typical sporadic amyotrophic lateral sclerosis in Chinese Han populations.
GeneReviews: Not available

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_037631.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    CD673366, CD673367

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    36354749..36355570 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_1

Genomic

  1. NW_003315908.1 Reference GRCh38.p13 ALT_REF_LOCI_1

    Range
    7746..8567
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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