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NGFR-AS1 NGFR antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100288866, updated on 25-Jan-2022

Summary

Official Symbol
NGFR-AS1provided by HGNC
Official Full Name
NGFR antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:55555
See related
Ensembl:ENSG00000249906 AllianceGenome:HGNC:55555
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in spleen (RPKM 1.1), prostate (RPKM 0.5) and 17 other tissues See more
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Genomic context

See NGFR-AS1 in Genome Data Viewer
Location:
17q21.33
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (49505657..49574064, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (47583019..47651426, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4E pseudogene 2 Neighboring gene long intergenic non-protein coding RNA 2075 Neighboring gene Sharpr-MPRA regulatory region 8308 Neighboring gene nerve growth factor receptor Neighboring gene microRNA 6165 Neighboring gene neurexophilin 3 Neighboring gene uncharacterized LOC107984999 Neighboring gene speckle type BTB/POZ protein

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_103773.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC006487, AC015656
    Related
    ENST00000514506.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    49505657..49574064 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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