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TTC34 tetratricopeptide repeat domain 34 [ Homo sapiens (human) ]

Gene ID: 100287898, updated on 6-Nov-2022

Summary

Official Symbol
TTC34provided by HGNC
Official Full Name
tetratricopeptide repeat domain 34provided by HGNC
Primary source
HGNC:HGNC:34297
See related
Ensembl:ENSG00000215912 AllianceGenome:HGNC:34297
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in testis (RPKM 2.4), thyroid (RPKM 0.8) and 14 other tissues See more
Orthologs
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Genomic context

See TTC34 in Genome Data Viewer
Location:
1p36.32
Exon count:
9
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (2636986..2801693, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (2078230..2301463, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (2568425..2718258, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene peroxiredoxin like 2B Neighboring gene Sharpr-MPRA regulatory region 11692 Neighboring gene membrane metalloendopeptidase like 1 Neighboring gene MMEL1 antisense RNA 1 Neighboring gene Sharpr-MPRA regulatory region 15700 Neighboring gene uncharacterized LOC105378602 Neighboring gene uncharacterized LOC105378601 Neighboring gene uncharacterized LOC112268220 Neighboring gene uncharacterized LOC107985732 Neighboring gene uncharacterized LOC105378600 Neighboring gene uncharacterized LOC105378598 Neighboring gene uncharacterized LOC107984904 Neighboring gene uncharacterized LOC105378599 Neighboring gene uncharacterized LOC124903825 Neighboring gene uncharacterized LOC124903826 Neighboring gene actin related protein T2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

General protein information

Preferred Names
tetratricopeptide repeat protein 34
Names
TPR repeat protein 34
TPR repeat-containing protein ENSP00000383873

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001242672.3NP_001229601.2  tetratricopeptide repeat protein 34

    Status: VALIDATED

    Source sequence(s)
    AC242022, AL592464, AL831784
    Consensus CDS
    CCDS55565.2
    UniProtKB/TrEMBL
    A0A1C7CYW7
    Related
    ENSP00000383873.4, ENST00000401095.9
    Conserved Domains (2) summary
    sd00006
    Location:689720
    TPR; TPR repeat [structural motif]
    cl26002
    Location:557925
    TPR_11; TPR repeat

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    2636986..2801693 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187515.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    187771..353522 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    2078230..2301463 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)