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LIN28AP2 LIN28A pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 100287388, updated on 4-Mar-2025

Summary

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Official Symbol
LIN28AP2provided by HGNC
Official Full Name
LIN28A pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:38056
See related
AllianceGenome:HGNC:38056
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LIN28AP2 in Genome Data Viewer
Location:
13q31.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (87379466..87380684, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (86583292..86584510, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (88031721..88032939, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370301 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr13:87694909-87696108 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:87732807-87733306 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:87776108-87776695 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:87780120-87780803 Neighboring gene NANOG hESC enhancer GRCh37_chr13:87783776-87784327 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:87838612-87839124 Neighboring gene ubiquitin B pseudogene 5 Neighboring gene uncharacterized LOC105370302 Neighboring gene MPRA-validated peak2098 silencer Neighboring gene MIR4500 host gene Neighboring gene formin-like protein 5 Neighboring gene NADH-ubiquinone oxidoreductase chain 5-like Neighboring gene microRNA 4500

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • lin-28 homolog A pseudogene 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022998.1 

    Range
    101..1319
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    87379466..87380684 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    86583292..86584510 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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